Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5080 |
Symbol | |
ID | 8361256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6325118 |
End bp | 6325669 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644967228 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_003124713 |
Protein GI | 256424060 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.96578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.478678 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTATAA ACAGACGAAC CGCATTAAAA CAGGTCCTGG TCGTCTCCGC TGGTCTGGCG TTCCTGCCGT CCTGTGTACG GAAAACGACT CCAGCTTCTA TTTCATTAAA GAATATAGCG GTAGATGGTG AGGGCGAGAA TATGCTGGCA TTGCTGGCAG ACACATTAAT TCCCACTACT TCGACACCTG GTGCGAAGGA CGTCAAGGCG CACTTGTTTG CACTGACGAT GGTGGATGAT TGCTTTAATA AGGAAGACCA GCAGAAATGG ACAGCTGGTA TGAAGGCATT TGCTGAACTG AGTGACAAAA AGAATGGTAA ATCATTCGAG AAAAGCACTC CCGAAGCAAG GACGGCCCTT TTGGAACAAC TCGATAAATC CAAAGCAGAA GAAGGGGGCG CTGCTTATTT CTATCACGCT ACCAAAAATC TGATCATCAG AGGTTATACC AATTCAGAAT TTTATCTTAC TAAAGTGCAG GTATACGAGC TGGTTCCCGG CCGTTTTCAT GGAAGCGTAC CTGTAAAACC AGTCGGCAGA AGAACTGCTT AA
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Protein sequence | MLINRRTALK QVLVVSAGLA FLPSCVRKTT PASISLKNIA VDGEGENMLA LLADTLIPTT STPGAKDVKA HLFALTMVDD CFNKEDQQKW TAGMKAFAEL SDKKNGKSFE KSTPEARTAL LEQLDKSKAE EGGAAYFYHA TKNLIIRGYT NSEFYLTKVQ VYELVPGRFH GSVPVKPVGR RTA
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