| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5058 |
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| Symbol | |
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| ID | 8361234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6304189 |
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| End bp | 6304932 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967206 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003124691 |
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| Protein GI | 256424038 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000256301 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0140106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTCATT TGAAAGTGCT GATCCTGGAA GATAGCCCTG ACGAAGCAAA CTACCTGGAG
AATTTTTTAC GTAAACAGGG ATGCTCCGAC ATCCGGATCA CAACAAACCT CAAAGACGCA
GTTACTGCCT ATGATGCGGA ACTGCCTGAT ATTTGCCTGA TTGACATTTA CCTGGCCAAC
AAACCAGACG GAATTCTATT TGCCGAAACG ATCAACGAGC ACCGGGAACA AAGACGTCCT
TTTATCTTTC TGACCAGTGC AGGGGATAGT ACCACGTTCC GTCTCGCCAA ATTCACGTCT
CCGTACAATT ACCTGTTAAA GCCCTACAAT CCGCTGGAAC TGGAATATGC CATCGAACTG
GCCCTTTCCA AGTTCAAACA GGAAGCTGCC ACTCCGCCTG CCCAGACCAT AACGCCGGTC
TCGGATACGC TGTTTATCAA AAAAGGGAAT CTGCTCCAGC GGATCGCTTT TGACGATATC
AGGTATATTG AGGTGGACGG GAAATACAGT AAGGTGGTTT GTCCGGCGGA GAAATTTGTC
ATCCAGCAGT CCCTTAAGGA CCTGCAGGCG CAGTTGCCCC CCGTACAGTT CTGCCGGGTA
CACCGTAACT ATATTGTTAA CGTGAAAGAG GTGACCAAGA TTAATACCTA TAATAACGAG
ATCTTCTTCA AAGACGGGGA ATCCCTGTTT TTCAGCCGCC GGTACATTGA TGAATTCCTG
CAGGCGTTTA AGATCTTCAA ATAA
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| Protein sequence | MIHLKVLILE DSPDEANYLE NFLRKQGCSD IRITTNLKDA VTAYDAELPD ICLIDIYLAN
KPDGILFAET INEHREQRRP FIFLTSAGDS TTFRLAKFTS PYNYLLKPYN PLELEYAIEL
ALSKFKQEAA TPPAQTITPV SDTLFIKKGN LLQRIAFDDI RYIEVDGKYS KVVCPAEKFV
IQQSLKDLQA QLPPVQFCRV HRNYIVNVKE VTKINTYNNE IFFKDGESLF FSRRYIDEFL
QAFKIFK
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