| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5056 |
|---|
| Symbol | |
|---|
| ID | 8361232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 6301764 |
|---|
| End bp | 6302522 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644967204 |
|---|
| Product | 4'-phosphopantetheinyl transferase |
|---|
| Protein accession | YP_003124689 |
|---|
| Protein GI | 256424036 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2977] Phosphopantetheinyl transferase component of siderophore synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000653358 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0119355 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTACTCC AAAGAGGGAA AATAGTTTTA AGCCGGGAAA ACAGTACCCA TCAGGCAGGA
TTTTGTGTAC TGCGGGCAGA CTTGCAGGAG CTGATTTCCA AATTTAACTT ATTACATGCT
CAGGAGAGAA CGTATTATGA TCAGCTCACG TTCGACAGAA GAAAACAGAG TTATCTTTTA
GGTCGTCTCT CCGCTAAAAA AGCAATCGGT GCACTTGCAG TATATGAGGA TCTGGAGAAG
ATCGCTATAA CAGCTGGTAT CTTTCAGTTT CCGGTGGTGC AATATGCCGT TACCCGTAAT
CTTCAGGTCT GTATCACGCA TTGCGATAAC CTTGGTATCG CGCTGGCTTA TCCTGAAGTA
CATCCTTTGG GGATCGACAT AGAAAAGACC AATAAAGCGA ATATAAGCGT CATTAAAGGG
CAATTAACTC CCGATGAAGT AATTCTTACC CAGGCCGTCT CCTTATCAGA CGATGCCTCC
TGTACGATGA TCTGGACCAT GAAGGAAGCA TTATCCAAAA TACTTCGTAC CGGCCTGACC
ATGGACATGA AAGTATTGGA GATACAATCA CTTGTAAAAG AAGGCCCGGA CCTGTATACC
AGCTATTTTA AACATCTTAT TCAATACAAG GCAATATCCT GCTTATCAGG ACCTTATGTC
TGCTCGCTTG TTATTCCGCG TAAGACTACT GTTGACCTGG AAGAATACTG GCAGGCATTC
CGTCAGGCAA CTGCCGCAAC AATGGAAAAT ATCCGTTGA
|
|---|
| Protein sequence | MLLQRGKIVL SRENSTHQAG FCVLRADLQE LISKFNLLHA QERTYYDQLT FDRRKQSYLL
GRLSAKKAIG ALAVYEDLEK IAITAGIFQF PVVQYAVTRN LQVCITHCDN LGIALAYPEV
HPLGIDIEKT NKANISVIKG QLTPDEVILT QAVSLSDDAS CTMIWTMKEA LSKILRTGLT
MDMKVLEIQS LVKEGPDLYT SYFKHLIQYK AISCLSGPYV CSLVIPRKTT VDLEEYWQAF
RQATAATMEN IR
|
|---|
| |