| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4993 |
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| Symbol | |
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| ID | 8361169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6241757 |
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| End bp | 6243565 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967142 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003124627 |
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| Protein GI | 256423974 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00438028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.145323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAGA ATATATTACC TGCTTTACTA CTTAGTTTGC TGACAGGCAT CAGCGCCTGC
TCACTGGAAG AAGTCAATCC GTCCGGATTC ACCATTGAAT CGGTCGCCGC TTCTTCTGTC
GATGGCTACA GAAACCTTGT TAATAATTGC TATTTCGGCA TGGAACGCCA GTTATACGGC
TATAACCAAT GGATGATGTT CTGCGAAGCA GGCACCGATA TCTGGACCTA TCAGAAGAAT
GGCGTTTCCT GGTCGCAGTT CTTTAAATAC AATGCCGGCG CCGCTTCCAA TCTCACAGTC
GGCAATGGTG TCTGGAACTC CTGTTACGAT GGTATCGGTT CCTGTAATAC CGCTATCAGA
TATGCAGCAA TCGCGCCCTT CACAACCGAA GAAGAAAGAA ACAAAGTAGT AGCAGAAGCC
TATTTCCTCC GCGCCATGTA TTACTACAAC CTGGTAGAGC AATTCGGCGG CGTTACCTTA
ACAACCGTTC CTGCAGCTAC GGTTGATCTG CATCCTGTCA GAACCTCCGC ACTCGATACC
TATAAACAAC TGATCATTCC TGACCTGGAA TTTGCTGTTA AATGGTTACC TGTTGATAAT
GGCACTACCA AACCGTCTAA GAAGGCTGCC CTGGGTTTCC TGGCCCGTGC CTGCCTCCAG
ACAGTCGAAT ACGACGAGAC TAGGGCAATG GCGTCTAAAG CACTGGAAAC AGCTAAATTG
CTGATCGATG ATTGCGAAAG TGGTGGCAGT AAATACAACA CCTACCTCTA TCCCACCTTC
GACGACGTAT TTCTGGAAAC CAATAACTAC ACAAACAAAG AGTCCTTGTG GTCACACCGT
TTTGTCGTGG GAGGCGTCAG CAATAATGCC TGGAACATGA ATATGAACAA TGAACTGTTC
TATTGTGTAG TCACCGACTT TGGCGCAATG CAACAGGTAG GGACAGATTA TACAACCTGG
GGACATCGTT CCGGCGGACA ATTCATGCCC AGCGCCTATC TCCTTGGCTT GTTTGTACAA
CCGGACGGCT CACTGGATCC CCGTTATCAT AAATCCTTCC AGACCTCCTG GACGGTCAAC
AAGCCGACTT ATAGCTGGAC AGACGCTGCA CTAAAAATAT TTGACCGGAG TAATGATATC
AGCACGGGTA CAACCCTCAA TACAGGAGAT CCCGGTATCG CATTCATCCA TCCCAATGAT
CCGGACTATA GCGCCCGCGT AGCAACGAAG TTGTCGCAGC CCTATCTCGT CGTTGACTAT
GCCGATGTAT ACGATGCCGG TACAAAATCC GTGAAGATGC AATATAACCG GGTAAACAGA
CCACTCGATG GCGGAGGTAC CACTACCACC AATCCCTTCT TCAGTTTCTA CCCTTCACTC
ACCAAACATA ACAGCAGCAA CTACTACGTT AATAATCCAA ACAACAACCG CTATGGTAAT
CTGAATGCCA CCTTTATAAT GCGCATGTCG GAAGTCTACC TGATCGCGGC AGAAGCCGAA
TTGTATGCTG GCGGTGGGAA TGCCCTGCAA TACATCAACA GGATCAGAAC AAGGGCAGGC
GCCGTTCCGC TGGGAAGTGT AAACATACAA GCCATCCTCG ATGAAAGAGC ACGGGAACTC
TGCGGAGAAT ATGTACGTTT CTATGATCTT AAACGTACGA AGAAGCTGAA CAAAGCGTAT
CTCCTGTCAA CAAATCCTGA CGTCGGACAG TATTTCATCG ACAATCAACA TGAAGTACGT
CCTATTCCGT CTGCATTCCT GAATACTTTA CAGGAAGGAG GCAGCTATTA TCAGAACCCG
AATTATTAA
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| Protein sequence | MRKNILPALL LSLLTGISAC SLEEVNPSGF TIESVAASSV DGYRNLVNNC YFGMERQLYG
YNQWMMFCEA GTDIWTYQKN GVSWSQFFKY NAGAASNLTV GNGVWNSCYD GIGSCNTAIR
YAAIAPFTTE EERNKVVAEA YFLRAMYYYN LVEQFGGVTL TTVPAATVDL HPVRTSALDT
YKQLIIPDLE FAVKWLPVDN GTTKPSKKAA LGFLARACLQ TVEYDETRAM ASKALETAKL
LIDDCESGGS KYNTYLYPTF DDVFLETNNY TNKESLWSHR FVVGGVSNNA WNMNMNNELF
YCVVTDFGAM QQVGTDYTTW GHRSGGQFMP SAYLLGLFVQ PDGSLDPRYH KSFQTSWTVN
KPTYSWTDAA LKIFDRSNDI STGTTLNTGD PGIAFIHPND PDYSARVATK LSQPYLVVDY
ADVYDAGTKS VKMQYNRVNR PLDGGGTTTT NPFFSFYPSL TKHNSSNYYV NNPNNNRYGN
LNATFIMRMS EVYLIAAEAE LYAGGGNALQ YINRIRTRAG AVPLGSVNIQ AILDERAREL
CGEYVRFYDL KRTKKLNKAY LLSTNPDVGQ YFIDNQHEVR PIPSAFLNTL QEGGSYYQNP
NY
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