Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4987 |
Symbol | |
ID | 8361163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6236163 |
End bp | 6236540 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644967136 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003124621 |
Protein GI | 256423968 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.432063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAAA GAAAAATCAC ATCCAGCAAT TCGCTCAATC TGCAAAAGCT GATCGGCTTC TGCGGAATGA TGTATGCCGT CGACATGCTG GCAGGAAGAT GGAAACTCGT CATCCTGTAT AAACTGGAAA AGAAAACGCT TCGTTTCGGC GAACTCAAAG CCATTATCCC CGAAATCTCC GACCGGATGC TCACCCTACA TTTACAGGAA CTGGAAAAGA ACGGCCTGGT CATCAGGACC GCCTATGCCG AAATTCCTCC ACGGGTGGAG TACCGGCTAT CCGACAGTGC CCGGAAACTA ACCCCTATCT GGCAACAACT GGAAGAATGG GCCATAGACC ATAAGACCCT CATGGATAAA AATATCCCCG ATTTGTAA
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Protein sequence | MGKRKITSSN SLNLQKLIGF CGMMYAVDML AGRWKLVILY KLEKKTLRFG ELKAIIPEIS DRMLTLHLQE LEKNGLVIRT AYAEIPPRVE YRLSDSARKL TPIWQQLEEW AIDHKTLMDK NIPDL
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