Gene Cpin_4966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4966 
Symbol 
ID8361142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6213117 
End bp6213605 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content49% 
IMG OID644967115 
Producthypothetical protein 
Protein accessionYP_003124600 
Protein GI256423947 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.104499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.177595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAG CGCGCAATCA TGATAAAGAG ATCGTAAAGA CACTGGAGCA GTTCCTAAAC 
GGGGGACATG CACATGCTAC CTTTGAAGAT GCTGTAAAGG ACCTGCCGGC TGCACTGAGG
GGAGAGGCGC CTGAGGGGAT GCCTTACAGT ATCTGGCAAC TGGTGGAACA CATCCGCATT
ACACAGTGGG ACATTCTTGA GTTTTCCCGT GATGCAGAAC ATACGTCTCC TGATTGGCCG
GAAGGTTATT GGCCGAAGGA GAAAGCGCCG AAAGATGATG CGGCATGGAA GCATAGTCTG
GCGCAGATTA AAAGCGATCT GAAGGAATTT GTTGCGTTAT TAAATGATCC TGATGTAGAC
TTGTATAAGC CATTTGCGCA TGGAGATGGA CAGCATCTGT TGCGTGAAGC GATGTTGATT
GCAGATCATA CCAGTTATCA TACAGGAGAG ATCATTGTGC TCAGGAGGCT ACTGGGGGCC
TGGAAATAG
 
Protein sequence
MTTARNHDKE IVKTLEQFLN GGHAHATFED AVKDLPAALR GEAPEGMPYS IWQLVEHIRI 
TQWDILEFSR DAEHTSPDWP EGYWPKEKAP KDDAAWKHSL AQIKSDLKEF VALLNDPDVD
LYKPFAHGDG QHLLREAMLI ADHTSYHTGE IIVLRRLLGA WK