Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4962 |
Symbol | |
ID | 8361138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6208322 |
End bp | 6209308 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644967111 |
Product | ABC transporter related |
Protein accession | YP_003124596 |
Protein GI | 256423943 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.113653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.20317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAAGC TTGAACGTGT CAACAAATCT TTTCAGAACG GCAAGCCTGC TGTCAGTGAT GTGTCTTTCG AGGTCAATAC AGGAGAAACC CTCGTACTGC TGGGTACCAG CGGAAGCGGG AAGACCACTA CCCTACGCAT GATCAACAGA CTCATAGCAC CCGATAGCGG AAAAATATAT GTGAATGGAG AGGCAGTGAC CAACCAGGAG ACCACTTCAC TTCGTCGTAA TATCGGCTAT GTCTTGCAGG ATAATGGATT GTTTCCGCAC TACACGGTCG CAGAAAATAT CGGTATTGTC CCCTCTTTAC TCAAATGGGA TAAAAAACGC ATAGAAGAAA GGACCCGTAC ACTGATGGAA AAATTGCATC TCCCTCCCAC CGAGTATTAT CATGCTTATC CGCAACAACT CAGCGGCGGA CAACAGCAAC GTGTCGGACT TGCCCGTGCC CTCGCAGCAG ATCCCCCGGT ATTACTGATG GATGAACCTT TTGGTGCACT GGATCCCGTA ACGAGAGCCA GTGTCAGAAA AGAATTCCGC TCACTTGACG AGATCAGCAA TAAAACCGTC ATCATGGTCA CACACGATGT ACAGGAAGCC TTTCAACTGG GCGACCGTAT CTGCCTCATG GATAAAGGAA CCATTCAGCA GACCGGCACG CCGGCCGAAC TACTGTTCGC TCCCGCCAAT GATTTTGTTA TACACTTTTT CCAGGAGCAA CGTCTGCTGC TGGAATTGAA TGCAGTGAAA CTGTCAGATA TCCGCACGTT ACTGCCGACA GACCATGTGA CGGAAAAAGG TTCGCCTATA TTACCGGAAG ACGCCTCCTG CTGGGATGCC TTAGAGCAGA TGACCACGCT CTCCAAACCC GTGTATTATT CTTTTGATGG CAAGCTCATT CGCATAGACA GCGCCGCGTT GATGCAGGCA TTTACACAAT ACAAGCAAAC TATCAGCAGC AATGGAAGAT CAACCCGGCT TTCCTGA
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Protein sequence | MIKLERVNKS FQNGKPAVSD VSFEVNTGET LVLLGTSGSG KTTTLRMINR LIAPDSGKIY VNGEAVTNQE TTSLRRNIGY VLQDNGLFPH YTVAENIGIV PSLLKWDKKR IEERTRTLME KLHLPPTEYY HAYPQQLSGG QQQRVGLARA LAADPPVLLM DEPFGALDPV TRASVRKEFR SLDEISNKTV IMVTHDVQEA FQLGDRICLM DKGTIQQTGT PAELLFAPAN DFVIHFFQEQ RLLLELNAVK LSDIRTLLPT DHVTEKGSPI LPEDASCWDA LEQMTTLSKP VYYSFDGKLI RIDSAALMQA FTQYKQTISS NGRSTRLS
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