| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4955 |
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| Symbol | |
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| ID | 8361131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6199937 |
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| End bp | 6201103 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967104 |
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| Product | Lycopene beta and epsilon cyclase |
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| Protein accession | YP_003124589 |
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| Protein GI | 256423936 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.127751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0780528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACATT TCGACTACAT CATTGCCGGC GCCGGATGCG CTGGAAGAAG CCTGGCTGTA
CATCTTATTC ATGCCCGCAA ACTGGCGGGT AAAAAAGTTC TTCTGGTAGA AGATATTGAA
GACAAGGAAC ACCGGCAGCA TTGGTGTTTC TGGGAAAAGG ATCCCGGTCT GTTTGACGAG
ATTGTCTCTC ACTACTGGGC TAAACTATCA TTTACGGGTA GTGAGGGCCA TCAGGTGCTA
GACATCGCTC CCTATCATTA TAAAATGATT ACTGCCGACC GCTTTTACGA TTATACCCAA
AAGCTCATTA CATCAGCTCC CAATGTAACG GTCCGGAAAG GGTTGATAGG GAAAGTTTTT
AACACACGGG GAAAATCGGC AGTGATTATC GACGGACAAC GTTTTACAGC GGAATATGTG
TTTAAAAGTG GTCAGCCTCC GCTGGCGTCA GACGCTGCGG AGAGCAACCT GATCCGGTCT
TTTAAAAGCT GGCAGGTGGA GACCGTCACA CCTTGTTTTG ACCCGGATAT GGCCACCCTG
ATGGATTTTA AGGCGGTGTC ATTAGACGAT AGCGGTTTCT TTTATACCCT GCCATATTCC
TCTACGAGAG CAGTGATAAC GTATACACTT ATTGCGGAGG AAATACCTGG TGAGGAGATG
TACGATATGG TGTTACAGCG CTATATGCGA CAGGAATTAC AATGTAGCCT TTATAGCATC
AGTCATTCAG AGACCGGGCA TATACCCCTG TATGAATATG CCCGTAACAG TGTCGATGAC
AGGATTATCT ATCTCGGTAC CGGCGCTTAT GATATCAAAG CTTCCGGCGG TCACGCGTTC
CGCTTTATAC AACGGCACTC GCAACATATC GCCCAGCGGC TCCTGGATGG GGAGCATCCT
GCTACCGGCG GCATCCGTTT TGATCGTTTT AGTTTTTATA ACAGCATCTT TCTTCGTTTA
CTCGCGTTGC CCGGGGTATC TTTAAAAGGG CTCTTTTCAC GCTTATTCCA GCGAAATGCA
CCTGCTACTA TTCTGAAATT CCTGGATCAT GAAACCTCGT GTTGGGAAGA ATTACGTATC
TTCACAACTC TACACAAACG GGCTTTTGCA ACAGAAATAT TCAAGAAATT GAAAGGACAA
ATTTCATCCA CAGCGAAAAG TTTTTAG
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| Protein sequence | MEHFDYIIAG AGCAGRSLAV HLIHARKLAG KKVLLVEDIE DKEHRQHWCF WEKDPGLFDE
IVSHYWAKLS FTGSEGHQVL DIAPYHYKMI TADRFYDYTQ KLITSAPNVT VRKGLIGKVF
NTRGKSAVII DGQRFTAEYV FKSGQPPLAS DAAESNLIRS FKSWQVETVT PCFDPDMATL
MDFKAVSLDD SGFFYTLPYS STRAVITYTL IAEEIPGEEM YDMVLQRYMR QELQCSLYSI
SHSETGHIPL YEYARNSVDD RIIYLGTGAY DIKASGGHAF RFIQRHSQHI AQRLLDGEHP
ATGGIRFDRF SFYNSIFLRL LALPGVSLKG LFSRLFQRNA PATILKFLDH ETSCWEELRI
FTTLHKRAFA TEIFKKLKGQ ISSTAKSF
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