Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4916 |
Symbol | |
ID | 8361092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6142579 |
End bp | 6150531 |
Gene Length | 7953 bp |
Protein Length | 2650 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644967065 |
Product | hypothetical protein |
Protein accession | YP_003124550 |
Protein GI | 256423897 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.284664 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACTG ACAGAACATT TACACTTGTT TGTTTTACGC TCCTTATTCT ATCACTCGGC CTGCCGCTTA CCGTGTGGGG TCAGACGACA AGCTGGAAGG GCACTGTGAG CACCGCATGG GCCACTGCTG ACAACTGGAC AGCGGGGGTG CCTACCGCAT CTGTAGACGC CATTATCGGC GATGCTGCGT TCACAGGTTC CTTCCAGCCT ACCATCAGTC TTACGACTGC TGCCAGTAGA AACCTTACAC TTGTTACCAG TGCCAAAAAC CCGGTACTGA CCATCTCCAA AGCCATTACC ATATCCGGTA CGCTCACTAA TGGCAGCGGC TGTACGATCT CGCACAGAGG CGTTACCGTT ACGGTAAAAG GAGACTTCGT CAATAACGGC ACCTATACGA CCACCAGTAC CTCCTCCAAG ATCACCATGG CAGGAATTAC ACAAAGTATC AGTGGTAGTG GGATTTCCTT CAGGAGACTG ACCATTAACT CAGGTGCTAC TGTCACTCCT GCTGTTAACT TTTCGGTTAT TGTAGCGCTT TCTGTCAGCG GCAACCTGGT TCCACCGGAA GGCACGACGA CACTGATATC CGGCGCCGGT ACACTTACTG TGACCGCCAC AGGGGTATTA CATGTCAAAG GGGCGACCTT CGCTACCAAT TATGCGCTTA CCAGTACGAC TACCCTTTCT GCCGGCAGTA CGGTAGATTA TAGCGCAACA ACCGTCAATC AGACTGTCCG GAATGACCTC ACCTACTCTA CCCTTCGCAT CAGTGGCGCA CTGGTGAAAA CCCTGGCGGG CAACCTTAAC GCGATGAACG CTACCACCAG CACATCGGGG ATGATCGTTG TCAATAGTGG CATCCTGAAC CTCTCCACCT TTACGGCGAA CAGAGGCACC ACCGTAGCCG GGGGAGCGGT CACTGTCGCG AATGGGGCAA CGCTTCGGAT TGGCGGTACA GGTACCTTTC CGGCTAACTT TGCGTCCCGT TCGCTGGCAC TGACAAGCAC GATCGAGTAC AACGGGCTCG CGCAGACCGT TTCCGGAGAA ACTTATGGGA ACCTGACATT ATCCAGTGCC AGTGGCGCTG TCGTCAAAAC GATGCCTGCG ACCGCATTTA CCGTAGCTGG TAATTTCTAT TGTACTCCTG GAGCCGGGAC CAGCGTAAGC TCCACTGCTG CATCCAATAT CATCGTCACA GGAAACATCA CAGTCGATGC CGGTGCCACG CTTAATGGCG GTAGTTTCAC ACTGGACATC GGCGGCAACT GGACCAACAA TGGGACTTTT TCCGGCAGCA CCGGTACCGT GAATTTTAAC GGGCCCGGTA CGAATATCAG CGGTACAGGT ACACAGGGCT TTAATAACGT CAATATCACC GCCACCAATA TCACTGCAAA CGCAAATACG GCTGTCACTA TCGCCGGTAA CCTGGCGACA ACCGGTCCGG GTGTATTTAC ACATGTGTCA GGTGGTACGC TGACAATGAC AGGTACAACC AAAACCATCT CCGGAACAAA TATCACACTG GATAACCTTA CAATATCCGG ATCTGTCAGC AGTTCCAGCA GTATCATACT GACAGGCAAT CTTGCCGTAA GTGGCTCCTT TACCGGCACA GGCGGATCTG TGACGATGCA GGGCGCCAGT AAAACCATTT CAGGGGCAGG TACTATTACA TTTGGTTCAT TGATCATACC AGGATCTGTT ACTACAGCCA TCCCCTTTTT CATTGGCACT ACACTGGATG TCAGCGGCAC ATTCAGTGCC AGCGCCGGCG CAGCTACTTT CACAGGTACC AGTACGCTCA ATGGTACAGC CAATCTGTTC AATGTGACGC TGAATGGTAC TTCGCTTCAA TTATCTACCA ATGCCGTACT CGGTATAGCC GGTACTTTCA CTGTTACAGC GGGTACGCTG GACGTATCCT CTACTGCACC TAATACGGTC AACTTCAACG GTACTACTGC ACAGAATATC AATGCCCTTA CCTACAACAA ACTATTACTC TCCGGCAACG CAGTCAAAAC AGCGGCGGGA GCTATCACGA CCAGCTATTT TACACTGGCA ACAGGAACGA CCTTTAATGC AGGTTCCTTT GGCCATACGG TACTGATTGA CTTTGTCAAT AGCGGCACCT TTAACGCCGG TACAAGTACG TTCACTTTTA CAGGCAGTAA TCTATCTACC ATTACCGGCG TCACTACATT CAACGTTCTT ACCCTGAACA AAAGCTTACA GTCGACACTG GTCAACCTGA ACAATGATGT GAATGTAGCT ACCGTCAACA TGAATGTCGG TACCATCAAT ACCGGGACTA ACATTTTCAA CATGACGGTG GATAGAAGTG GACCGGGGAT CATTCTGGGT AACGTACGCC GTACACAGTC CTTCGGACTA GGCGGTATAT ACGCCTTTGA GAGCCCGAAT ACGACGCTGA GTCTTGTGGG ACTTCCATTA ACAGGCGCCA TCACCGTTTC TGTCGCCATT GGCCCTGTAA GTGACTTCCC GCAGGGTAGT GCCGTTAACC GCGTATATAC GGTCAGCACT GGTCTGACAG TTAGTTTGAC TACCCTCCGG TTTCACTATG AGGATGCCGA GTTAAACGGT AACAATGAGT CCACGATGAA CCTGTGGTAC AACAGTGGCA GCAGCTGGGT ATTCCAGGGC AGAACGGCGG GTAATACAAC ATCCAATTAT GTAGAATATG GTGCTACGCT GGCCATCAAT GGCCGCTGGG CCTTCTCAGA TAATTCAAAC GTAGTACGCT GGAATGGATC TGTGAGCAGC GACTGGTCTA ATGCTAACAA CTGGACAGTG GTGCAGGGTA GCCCTTCACG TCCGCCAGGC GCGAATGATA TCGTAGAAAT TGGTACAGCA GCATTCACCA ATCAGCCGAC GATCAACACC GCTGTAGCCG TAAAAGCAAT CTCCCTGGGT AGTACACAGG CAGCGACGCT TACTCTTGCT TCGGGAGGTA GTCTGACCAC ACAGGGTAAT ATTGCCGGTA AATGGTCTGC CAATGTTACC CATACGATCA ACACAGGCGC TCAGGCACTC ACCGTAAACG GAGACCTTGC CCTCAGCGAC GGTACTACCG CACATGCGAT CAACCTGAAC ATCGGTGCTG GAACAGTCAC TGTAGGTGGT TCTCTGACGC AATCCGGGGG CGCTAATATC ATATTCTCCG GTGCAGGTAA TCTGAACATC GGTAGCAACT ATAGCTACAC CAATGGCACC TTTACACCTG CCACCGGGAC TGTGAACTAT AATGGCAGCG GTGCGCAGAC GGTGGCAGGA TTAGCCTATA ATAACCTGCA AATAGGCAAA TCAGCCGGGG ATGCATTGTT AAGCAATACA GCCAGTGTTG CAGGAGACCT GAATATAACC GGCGGTTCCA TGACCATGAA TGCTGCCACT ACGGTAACGG GCAATGTCAA TATATCCTCC GGTGCTACGT TGAACAGTGG GGTCATCGGA CTAACTGTTG GCGGCAACTG GAACAATAGC GGCACCTTCT CGTCTTCCGG TGGTACGGTT ACGTTAAATG GTACAGGTAC ACAAACCGTC TCTGCCACGA CTTTCAATAA CCTGATCATC AGCAAAGGCG CCGGAACGGC TACGCTAACC GGCAACTGTC CGCTCAACAG TAACCTGACC GTCAATACCG GTACGCTGAA CCTGTCTACT TTTACTGCCA ACAGGGCTTC AGCCGGCGGT ACATTTACAC TCGCGAATGG CGCTACGTTA CAGGCAGGTG GGGCAAACAA TTTCCCTGCA GGCTATTCTA CCTATACATT AGGCGCGACC AGTACGACCA ACTATAATGG AACCGTCGCA CAGGCGGTTG CTGGTGTGCC GTACGGTCAT CTTATCTTCA GCAATGGCGG CACAAAAACA CTGTCCGCTA CCTGCACCGT CAACGGAGAT CTGACCATCA ACAGCGGCGC TACTTTCAAT GGTGCAACCT ATACCATCAA CCTCTATGGC AACTGGAACA ATAGCGGCAC CTTCGTTCCT GCTACCAGTA CGATCACACT CAATGGCCCT ACCAAAACCA TCACAGGAAA TACTATCTTC AATCGTCTGA CTATATATGG CAGTTATACC GTCAGCAGCA GCGACATTAC CTATAACGGT CTGCTGACCA TAGCCACTGG TGGCTCATTC AATGCAGGTG CGGGAGTAGC TACTGTAAAT GGTGACCTGA CCAACAATGG ATCGCTTACC AGCACCGGTA CCACTACCTT CACCGGTACC ACCTTACAGA CGATCCGTTT TGTCAATGCA ATTACGTCTA ACTCCAGCGG CATTATCAAT TTCAACGGCA CTGTACCGCC TGTGCTCAAC TCCACCAGTA CGCCCACCTA CGCTACACTT AACGTCAATA ACACCGGCGG TGTTACGGCA AGCGTTGGCT GGATCGTCGG AATCGCTTTC AACATCGGAA ATGGCGCTAC TTTCAATGGC GGTGTTTCTA CGCATAATGT GCTCGGTTCA TTCACAAACA ATGGTACGGT GACCAGCAGC GGTACGATGA ACTTCATTCC CTCAGCGGCA CAAACCATCA AACTGGCCGG CAACGCATTT ACCAGTACAG GGACCGTACA ATTCGGCGGT ACCGGTGCGA TGAGTGTAAC CGGCACCCCC AATGCCCTGT CCCACGTTGT GATCTCCAAT ACGTCCGGTG TAACCCCTGC TTCGAACTGG CCGGTCAATG GAGATTTCCA GATCACCAAC AATGCCGTCT TCAACGCAGG TACTTATACA TATACAATAG GTGGTGACGT AGAAAGCAAT GGTACACTGA ACGGTGGCAC CTCTCTGTTT ACCTTGACAG CAGCAGATGC ACAGTTGACA GGTACACCGA ACACTACCTT TTATGACCTG ACGATTACGG GTACCACCAC TGCTATTTCC GACTATAACG TCAGCCATAA CTTCACCAAT AACGGCACCT ATGATGGGAC GGTAGGCGCC CTGACCATGA CTGGTGGCCT GCCTTCCGTC ATTACCGGTT CCGCTGCTTC ATTCAACCTG GCACAGGTCA CTAACCAGAA AGACCCCGGC GTTACAACTA CCCTCGCTAA AGCTATCACC GCGGTAGATG ATATCACGAT CTCGACAGGA ATACTGGATG CAGCAGGATT TGCCATCACA CCAAGTGCGA CCGGTTCACT GACAATTGAA GACAATGCCC GCCTGATACT GCGTGGTACA CAAACCTTAC CAGCCTTCAG TACCTACACG TTGGACACGC TCAGTACCGT AGAATATGGC GGCAGTACAC AGGCTATCTC CTCTGCTACA CCTTATGGCA ACCTGGTCAT CTCTGCAACA GGATCTAAAA CAGCATCTGC GGTATTAAAA ATTCTGAATG ACTTTACCTT GTCAACCGGC ACTTTCGTAC AGGGTAGTTT TACGGACACG GTCGGCGGTA ACTGGACAAT GAGCAGTGGT ACTTATACCA ATACCGGTTC AACGGTTTAT TTCAATGGCC TCGGTACGCA GACTATCACC TCTACCGGTG CATTTAATAA CCTGACCGTT AATAAATCAG CGGGTATTAT CAATCTCGAA TCTAACGTGA CAGTCAGCAG TGTCCTGAAT TTCATCCTGA ATAAGATCAA TACAGGCAGC ACATTCGCCC TGATTCAGCC TACTACCGGT ACAGTGACCG GCGCCTCCCA ATCTACCGGC TGGGTGATAG GCCGACTACA AAAAGCTTTT CCAACCGGTA GTGCAACCAG GAATTTTGAA CTGGGTGATG CCACTTATTA CAGTCCTGCA TCTATCACTT TCGCCAATGT GACTACCTCT GGCAGCATAC TGGCTACAGT CACGCCAACA GATCATCCTA ATATTGCCAC CTCTCCGGTG AATCCTAACA GAAGCGTCAA CCGCTACTGG TCATTCACCA ATACAGGCAC TGGCTTTACC ACTGCGTCCG TTACGATGAA CTGGAACGCA GCAGATGTAG ATGCAGGATC TAATACGGCT AATTTCAAAG TAGGGAGCTA TAATGGCTCT GCCTGGACGA CGCCAGCAAC CGCCAGTCCG CTACCAACCT CCATACAGGC TACTGGTCTG ACGAATTTAA GTGTGGCGCT TGCCGTCGGA CAACTAATCG CTGATAACGT CTGGACGGGC GCTGTAAGTG TTAACTGGTT CGTGACCGGC AACTGGTCCA ATAACCTGGT ACCTGTCAGT ACAACCAACG CAACGATCCC TACAGGTCTG ACCAACTATC CGCTGATCAA TACGGGTACC GCAATGACCG GCAACCTGAT CATACAAACC GGGGCTTCTG TTACCGTCAG CGGCGGTACC TTACAGATCT ACGGCGCAAT CACCAATAGC GGTACATTTA CCGCCAGCAA CGGCAGCATC GAAATGACCG GTTCCACTTC CCAGACAATA CCTGCAAATA CTTTTGCCGG TAATACAGTG CTCAACCTCA CAACTAACAA CGTAGCGGGT GTAACACTAC AGGGAGCGCT CAATATTGCC GGTGTGCTGA AAGCCACCGC AGGTCTGTTC GTGACAGGCA CCAACCTGAC TTTATTGTCC ACAGCTACCC GTACGGCGTT GATAGATGGT AGCGGTGTCG GCTCCGTATT GGGCAGCGTC ACCATCCAGC GTTACCGTCC GAACAGCTTT GGTTATGTAT ATCTCAGTTC GCCGTTAAAC GCAGCTACCG TGAATGAGTT TTCGGATGAT GTGAATTTGA ATTCCAGCTT CCCGTCTTTC TATCGTTATA TAGAAAACAG GGCCTCTTCC GGTTGGGTAT CCTACACAGC CGCTTCAGGT ATCCTTGCAT CAATGGTAGG CTATGCCGGT AATCTGGGTA CCAGCATGTT CCCTGTCACC CTCGATATGA CTGGTACTGT AAATAACGGT ACCATTACAG CTCCTACCCT TACCAACAAT AACCAGCCTT ATACCAAAGG CTTTAACCTG GTAGGGAATC CTTATCCGTC GCCGGTTGAC TGGGATGCAG TCGGTGGATG GACACGCGTG AATGTCGATA ATGCAATTTA TTACTTCAAT GCAGGTACAA CCAATCAATA TACCGGTACT TATAGCTCTT ACATCAACGG CGTATCCAGC GATGGTGTAG CTAACAATAT CGTTCCTGCC ATGCAGGGCT TCTTTGTACA CGTGACAAAT GGTACATTCC CGGTATCAGG TACGCTGACG GTCAACAATA CCGCCAGGGT CAATAACCTC ACGCCTAACT TCCACAGGGA AAGACCGCTG ACGGAACCAT TGCTGCGCCT TTGCGCGGGC TTTACAGATG AAGGATCTCC TTCCGATCCG GCAGTGATCT ATTTCGACAA TAGCTATTCC AGAGATTTCG AACAGGACAT TGACGCCCTG AAAATTATCA ATACAGACGA ACATGTACCT AATCTGTATG TCATGGCAGG CACAGAACGA CAATCAATTG CCGCATGGCC CAATGACATA GATAGTACTG AAATGATCCC GCTGGGTATC ACGACTGAAC AGGAAGGATA CGTCAGCTTT ACCATGCCAC TGATCGAGCG CATGCCGGCT GGCAGACATT TCTACCTGTA CGATAAAGAG GCGGGCATAA CGCATGATCT GCATCAGACG ACGCCCTACC GGCTGTTCCT GCGTAAAGGA AGTTTTGATA CCCGTTTCTT CCTGGTATTG AAAGCAGGTG ATGATGGCGC AACCTCTGCT GAAACACCGT TTTATCATGC TTACGCGACT GGCAATAATC TGTACGCTCA GTTTGACAAA ATACCCGGAG AGAAATGTAC GATCACAGTC AGCAATGTAA ACGGGCAGGT ACTGTTGCGA AAAGACTATA CCGGCAATGG CCGTTATCTG CTGGGGTCAC ATTACAACGG AGGTATTTAC GTCGTCACCT TCTACGCAAA CAAACAGCAG GTATCGAAGA AAGTGTTTAT CGCTAACCAA TAA
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Protein sequence | MNTDRTFTLV CFTLLILSLG LPLTVWGQTT SWKGTVSTAW ATADNWTAGV PTASVDAIIG DAAFTGSFQP TISLTTAASR NLTLVTSAKN PVLTISKAIT ISGTLTNGSG CTISHRGVTV TVKGDFVNNG TYTTTSTSSK ITMAGITQSI SGSGISFRRL TINSGATVTP AVNFSVIVAL SVSGNLVPPE GTTTLISGAG TLTVTATGVL HVKGATFATN YALTSTTTLS AGSTVDYSAT TVNQTVRNDL TYSTLRISGA LVKTLAGNLN AMNATTSTSG MIVVNSGILN LSTFTANRGT TVAGGAVTVA NGATLRIGGT GTFPANFASR SLALTSTIEY NGLAQTVSGE TYGNLTLSSA SGAVVKTMPA TAFTVAGNFY CTPGAGTSVS STAASNIIVT GNITVDAGAT LNGGSFTLDI GGNWTNNGTF SGSTGTVNFN GPGTNISGTG TQGFNNVNIT ATNITANANT AVTIAGNLAT TGPGVFTHVS GGTLTMTGTT KTISGTNITL DNLTISGSVS SSSSIILTGN LAVSGSFTGT GGSVTMQGAS KTISGAGTIT FGSLIIPGSV TTAIPFFIGT TLDVSGTFSA SAGAATFTGT STLNGTANLF NVTLNGTSLQ LSTNAVLGIA GTFTVTAGTL DVSSTAPNTV NFNGTTAQNI NALTYNKLLL SGNAVKTAAG AITTSYFTLA TGTTFNAGSF GHTVLIDFVN SGTFNAGTST FTFTGSNLST ITGVTTFNVL TLNKSLQSTL VNLNNDVNVA TVNMNVGTIN TGTNIFNMTV DRSGPGIILG NVRRTQSFGL GGIYAFESPN TTLSLVGLPL TGAITVSVAI GPVSDFPQGS AVNRVYTVST GLTVSLTTLR FHYEDAELNG NNESTMNLWY NSGSSWVFQG RTAGNTTSNY VEYGATLAIN GRWAFSDNSN VVRWNGSVSS DWSNANNWTV VQGSPSRPPG ANDIVEIGTA AFTNQPTINT AVAVKAISLG STQAATLTLA SGGSLTTQGN IAGKWSANVT HTINTGAQAL TVNGDLALSD GTTAHAINLN IGAGTVTVGG SLTQSGGANI IFSGAGNLNI GSNYSYTNGT FTPATGTVNY NGSGAQTVAG LAYNNLQIGK SAGDALLSNT ASVAGDLNIT GGSMTMNAAT TVTGNVNISS GATLNSGVIG LTVGGNWNNS GTFSSSGGTV TLNGTGTQTV SATTFNNLII SKGAGTATLT GNCPLNSNLT VNTGTLNLST FTANRASAGG TFTLANGATL QAGGANNFPA GYSTYTLGAT STTNYNGTVA QAVAGVPYGH LIFSNGGTKT LSATCTVNGD LTINSGATFN GATYTINLYG NWNNSGTFVP ATSTITLNGP TKTITGNTIF NRLTIYGSYT VSSSDITYNG LLTIATGGSF NAGAGVATVN GDLTNNGSLT STGTTTFTGT TLQTIRFVNA ITSNSSGIIN FNGTVPPVLN STSTPTYATL NVNNTGGVTA SVGWIVGIAF NIGNGATFNG GVSTHNVLGS FTNNGTVTSS GTMNFIPSAA QTIKLAGNAF TSTGTVQFGG TGAMSVTGTP NALSHVVISN TSGVTPASNW PVNGDFQITN NAVFNAGTYT YTIGGDVESN GTLNGGTSLF TLTAADAQLT GTPNTTFYDL TITGTTTAIS DYNVSHNFTN NGTYDGTVGA LTMTGGLPSV ITGSAASFNL AQVTNQKDPG VTTTLAKAIT AVDDITISTG ILDAAGFAIT PSATGSLTIE DNARLILRGT QTLPAFSTYT LDTLSTVEYG GSTQAISSAT PYGNLVISAT GSKTASAVLK ILNDFTLSTG TFVQGSFTDT VGGNWTMSSG TYTNTGSTVY FNGLGTQTIT STGAFNNLTV NKSAGIINLE SNVTVSSVLN FILNKINTGS TFALIQPTTG TVTGASQSTG WVIGRLQKAF PTGSATRNFE LGDATYYSPA SITFANVTTS GSILATVTPT DHPNIATSPV NPNRSVNRYW SFTNTGTGFT TASVTMNWNA ADVDAGSNTA NFKVGSYNGS AWTTPATASP LPTSIQATGL TNLSVALAVG QLIADNVWTG AVSVNWFVTG NWSNNLVPVS TTNATIPTGL TNYPLINTGT AMTGNLIIQT GASVTVSGGT LQIYGAITNS GTFTASNGSI EMTGSTSQTI PANTFAGNTV LNLTTNNVAG VTLQGALNIA GVLKATAGLF VTGTNLTLLS TATRTALIDG SGVGSVLGSV TIQRYRPNSF GYVYLSSPLN AATVNEFSDD VNLNSSFPSF YRYIENRASS GWVSYTAASG ILASMVGYAG NLGTSMFPVT LDMTGTVNNG TITAPTLTNN NQPYTKGFNL VGNPYPSPVD WDAVGGWTRV NVDNAIYYFN AGTTNQYTGT YSSYINGVSS DGVANNIVPA MQGFFVHVTN GTFPVSGTLT VNNTARVNNL TPNFHRERPL TEPLLRLCAG FTDEGSPSDP AVIYFDNSYS RDFEQDIDAL KIINTDEHVP NLYVMAGTER QSIAAWPNDI DSTEMIPLGI TTEQEGYVSF TMPLIERMPA GRHFYLYDKE AGITHDLHQT TPYRLFLRKG SFDTRFFLVL KAGDDGATSA ETPFYHAYAT GNNLYAQFDK IPGEKCTITV SNVNGQVLLR KDYTGNGRYL LGSHYNGGIY VVTFYANKQQ VSKKVFIANQ
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