| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4884 |
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| Symbol | |
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| ID | 8361060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6108078 |
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| End bp | 6110480 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967034 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003124519 |
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| Protein GI | 256423866 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.954855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGTG TCCCGTTATT CTGTATCATC TTACTTTTCT TTGCGAAGCA CCTGCACGCG
CAATCCATAA AAGTGACGCT TTCCGGGCAG ATGAAAGAAG ATTCCGGCAA GCACCCCTTA
CCATTTGTAA GTGTGACCCT CAAAAAAGCA AAAGACAGTA GTTTTGTATC CGGTACTATC
TCCGGTGATG ATGGCCGCTT CAAACTCGCA GACCTCAGCA GTGGCAACTA CCTGCTGGAA
TTCTCCTATA TTGGCTATCA GCCGCTGATA CAACATCTGA CTATCGGACA ATTAAGTCCG
GTACTGGAAC TGGGCAGTAT AGAACTGGCT GCGGACCCCA AATCCCTGAA CACGGTGACC
ATCACCGGTA AACAGGAAGA AATCCGGCCG GATAAGAAAA CATTCAGTGT AGCCGATAAT
ATCAGTCAGG CAGGTGGCTC TGTACTGGAA GCAATGAAAA ACCTCCCCGG TGTAACTACC
CAGGATGGAA AAATTCTGCT GAGAGGCAGT GACAAGGTCA TGGTATTGAT GGACGGGAAA
CAGACGGCGC TGACAGGTTT CGGCGGACAA ACAAGCCTGG ACAATATCCC TGCCTCCGCC
ATCGAAAAGA TAGAGATCAT CAACAACCCT TCTTCAAAAT ATGATGCCAA CGGCAATGCC
GGCATTATCA ATATCATCTA CAAAAAAGAG AAAAAAGACG GCTTTAACGG CAAAATCGGT
TTAAGTGCAG GTGCGGGTGC TTTATGGATA AAAAGACAGA ATTATCCTAC TATAAGACGT
CAATACCAGG GTACGCCCAA GATCAATCCT TCGCTGTCGC TGAACTACCG CAAAAACAAA
GTCAATTTGT TCCTGCAGGC AGACGATCTG TATACCAAAA CACTGAATAA AAACGAATTT
GCAGACAGGT ATTACGATAA CGGTGATGTG GTAAAACAAC AGACCAAACG TAACCGGAAT
ACCAATTTCT CCAATGTAAA AGCAGGTATG GACTGGGCCA TTGACGGCCG CAATACCATC
ACCGTTTCCG GGATGTATGG TACAGAGAAA ATACTGGACC ACGGAGATGA ACCTTTCTTT
AATGGTAACC TGACCGAAAG ACAGCGCCTC TGGCAATTCC TGGAAGATGA ACTGAAGACT
ACCATAGTAG GATCTGTGAT CTGGCAGCAC AACTTCCATG CACCCGGCAG AACCCTGAAT
GTAAGCCTAA GCAGCACTTT CCACAGGGAG GATGAAAAGT ACTTCTTTAC GAACATTATG
CCCGAATATA CCGGTATTGA CTCATTCAAA GTCCTGTCTG ACGAGCACGT TACCGACCTG
ACTATCGATT ATGTACAGCC CCTGCGCCAT GGTCGTTTTG AAGGTGGGGT GAAATTCAGG
TACCGGTATA TTCCGGTGAA CATGGATTTC AAACCAGGTC TACATTCTGT GCTGGATGCC
CGTGCCGGTG GATTTACACG CTACAAGGAG AATATCCCGG CTATTTATGG TAACTACGTC
TACGAGAACA AACACTTCGA ACTGGAAGCC GGTCTGCGAC TGGAATATGT ACACCTGGCC
TATGACGTCA ATCCGAATCA CCCGGTATAC AAAAGCGACG GCTACAACTA TACACAGCCA
TTCCCAAACC TACGACTGGC TTATAAACTG ACGGACAACA ACAAGGTATC CTTTTTCTAC
AACCGCCGTG TAGACCGGCC TAACGAAGGC GATATACGCA TCTTCCCGAA ATATGACGAT
GCGGAAATCA TCAAGGTAGG TAATCCTGCA CTTCGGCCAC AGTATACCAA TCTCTTCGAA
CTGGGTGATA AAACCAGCTG GAATAAAGGA TACCTGTTCT CCTCCGTTTA TCACAAACGC
ATGGATGCTA CCATTACCCG TATCGGCAGC ACCGTACCAG GCAGTAATAT CATCTATAAT
ATCTTTCAGA ATGCCGGTAA AAGCTACATG ACGGGTATCG AACTGGTATT CTCCCAAAAG
ATGGCAGAAT GGGCCACCTT TAACCTGGCC CTGAACGGGT ATAACAATAT CATCGATTCC
TTTACCGTGG TGAACAAATA CCCGGTTGAA AACACCTTCA GTGCTGCCCG TGAAGATATC
TTTTCCGGTA ACGTCAAGCT GAACGGTCAG TTCCGTTTCC CTAAACAGAT AGACGCACAA
TTGAGTGCGA TTTACCAGGC GCCTGACCTG GTACCGCAGG GAAAAATCTA TTCCCGTTTT
TCTGTAGATT TGGGTGTCAA AAAAACGATT CAACAGGGAA AAGGAGAGAT CTTTGTGAAT
GCAACCGATG TGGCCAATAC ACTGCGTAAT AAAAGAGAAA TCAGGGGCAA TGGATTCCGT
TATCTCGCGA CTGATTATAA TGAGACCCAG GTGATCCGTG CCGGATATAG TTATAAATTC
TGA
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| Protein sequence | MKGVPLFCII LLFFAKHLHA QSIKVTLSGQ MKEDSGKHPL PFVSVTLKKA KDSSFVSGTI
SGDDGRFKLA DLSSGNYLLE FSYIGYQPLI QHLTIGQLSP VLELGSIELA ADPKSLNTVT
ITGKQEEIRP DKKTFSVADN ISQAGGSVLE AMKNLPGVTT QDGKILLRGS DKVMVLMDGK
QTALTGFGGQ TSLDNIPASA IEKIEIINNP SSKYDANGNA GIINIIYKKE KKDGFNGKIG
LSAGAGALWI KRQNYPTIRR QYQGTPKINP SLSLNYRKNK VNLFLQADDL YTKTLNKNEF
ADRYYDNGDV VKQQTKRNRN TNFSNVKAGM DWAIDGRNTI TVSGMYGTEK ILDHGDEPFF
NGNLTERQRL WQFLEDELKT TIVGSVIWQH NFHAPGRTLN VSLSSTFHRE DEKYFFTNIM
PEYTGIDSFK VLSDEHVTDL TIDYVQPLRH GRFEGGVKFR YRYIPVNMDF KPGLHSVLDA
RAGGFTRYKE NIPAIYGNYV YENKHFELEA GLRLEYVHLA YDVNPNHPVY KSDGYNYTQP
FPNLRLAYKL TDNNKVSFFY NRRVDRPNEG DIRIFPKYDD AEIIKVGNPA LRPQYTNLFE
LGDKTSWNKG YLFSSVYHKR MDATITRIGS TVPGSNIIYN IFQNAGKSYM TGIELVFSQK
MAEWATFNLA LNGYNNIIDS FTVVNKYPVE NTFSAAREDI FSGNVKLNGQ FRFPKQIDAQ
LSAIYQAPDL VPQGKIYSRF SVDLGVKKTI QQGKGEIFVN ATDVANTLRN KREIRGNGFR
YLATDYNETQ VIRAGYSYKF
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