| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4862 |
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| Symbol | |
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| ID | 8361038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6081865 |
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| End bp | 6083031 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644967012 |
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| Product | Hedgehog/intein hint domain protein |
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| Protein accession | YP_003124497 |
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| Protein GI | 256423844 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01443] intein C-terminal splicing region
[TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0141678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.178748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGC AGTGGTTAAC AGAAAAGCAT TACCTGGTAT GCCCTAAGGG CGTCATGTTC
AAGCAGATGA AGGTGATGAG TCAGCGGGAA GTTTCCTTTA GCGGACATCT GGCGGCAACA
ACGGCGGATA CGATGATCGG GAATGCGTTC ATGTGTATGG GTAATCTGGC GGTTGCAGCG
CCGCCGGTAT CTGTTTTGCA AAAGAAGGCA GTAGCGGTGA TGAGTGTGCC GGGTATCGGA
TTGCCACGTA TGGGTATACC CCCTAATCTC CTGTTGCTGG CCAGTGGTAT GGGAACGATG
AAATGTAACC TGAGTGCGCC TGCAAGGAAG TGGATCGGTG CATCTACTAA ACTGGAGATC
AACGGACATG CGGCATTGGT AGTGGGCCGG AGTAAGTTGT TATGTCCTTC AGAGGCGGTG
ATGATTGATA GTGTGGATAC TTTCTGGCTG GCGATGACGG CCACTAGTCG CCGTAACCTG
GGCAATATTG CAGCGTTTGC GTATAGTCTG CTGGCAGGCA GGGGATTGGG TAATATGAAT
GGCGGGCAAC AAGGCGCGCC TGCGATGTTC AATCCGGCGG CTTTATCAGG AGCGACCAGT
CTAATAAGTC GTCAGGTAAA GGGGACGTCT GTTTTTTCCG GTTCACCGGA GGAAGTCTGG
AATAGCGAAG AACAGCGCAG CGCTAACCAG TTACAGGCCA GCGGTACGGA GCTCACTATC
TCCCTGTTTG CTGCGAAGGG CGCAACCATG ACCTGTTTTC CGGCAGGCAC ATTGGTATAT
ACGAATAATG GCCTCTTACC GATCGAAACG ATCACACAGG AGGTGTTGCT CTGGACAATG
GACGAGCAGA CAGGTGAGCG ACAGCTGAAA CCGATTAAGG AACTGCATAG ACGTACGGCT
TTGAGTATGG TGGTGGTCGA ACTGGAAAAC GGGATTCTGT TTGAAGTGAC CCCTGAGCAC
CCGTTTATGA CAGCAACCGG TTGGATGGAA GCAGGAGCCT TGGCACCCGG TCATGTGTTA
GAGAATATTA CTGGTCAGCC GGTAGGGATA CGCCATACAG GATTGATTCC TGCCAGTACA
ACCGTATATA ATTTCTCGAT GTATGATAAC GAGAACTATT TCGTGACAAC AGAAGGCATA
TTGGTACATA ATGCCTCTTA TTGCTGA
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| Protein sequence | MEQQWLTEKH YLVCPKGVMF KQMKVMSQRE VSFSGHLAAT TADTMIGNAF MCMGNLAVAA
PPVSVLQKKA VAVMSVPGIG LPRMGIPPNL LLLASGMGTM KCNLSAPARK WIGASTKLEI
NGHAALVVGR SKLLCPSEAV MIDSVDTFWL AMTATSRRNL GNIAAFAYSL LAGRGLGNMN
GGQQGAPAMF NPAALSGATS LISRQVKGTS VFSGSPEEVW NSEEQRSANQ LQASGTELTI
SLFAAKGATM TCFPAGTLVY TNNGLLPIET ITQEVLLWTM DEQTGERQLK PIKELHRRTA
LSMVVVELEN GILFEVTPEH PFMTATGWME AGALAPGHVL ENITGQPVGI RHTGLIPAST
TVYNFSMYDN ENYFVTTEGI LVHNASYC
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