| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4852 |
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| Symbol | |
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| ID | 8361028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6068093 |
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| End bp | 6070333 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967002 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_003124487 |
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| Protein GI | 256423834 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0325493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCA TCCGCTATAT ACTTTCTATC AGCTTTCTAC TGCTTACGGT CTGTGGACGG
TCTCACGCAA CTGTGTTTCT TTCCGGAGAA GACGAGCGGT CCGCTGCCAT TGCCACCATA
CATACCTTAT GGCAACAGGG GGATCGCATT CTTGCTAAAC CCCATCCGCT TACAGCCGAT
TGCGATAGCG CAAAACATAT CTCACAGAAG ATGGCCACCC TCAGCCGCAG GTTTAATTAT
GACCAGGGAT TAGGTCTCAG CCAACAGCTC ATGAGCGCTG CACTGCGTTA CAATAACCAG
GGCAACGAGG CCATCGCTTA TGCCATGGAA GCCGTAGACA TCCTCAGTAA AGCGGGTACG
GAAAAACAGA AAGCAGACGC CTTTATCGAA CTGGCAGGCT GCTACAGCAA TGCCGATACC
GACCTTCCTG TTAAGATATC CCTGTATGAA AAAGGCGCCC GTAGCTATCA CCAGCTGGGC
GATAAAGTCC GCGAAGCCGC CCTGCTGGAA ATGATCGGCG ATCTCTATCA GCTAAAGAAA
GACTATACCA CCGCCCTGTC CCGGCTAAAA CAGTCACTGG CACTTTACCA GTCCGCCGGC
TTTCAGCGCC TGCAGGGCGT CTATGCACTG ATCGGCACCG TCTGCAATGA ACAGAACAAT
TTCGTCGAAG GCTTACGTTA TAATATGCTC GCCGTTCAAA CCGGCGAACA GGTAAAGGAT
ACAAGTCAAC TGATGGCCAC CGTCTACCAC CGCCTGGGCA TGAGCTATCA TAGTATCAAT
TATACCCGGC AGGCACTGGA ATATTATAAA AAAGCACTCC TCCTCGCCTA TCAGCTGAAC
GACTCGGCCG CTGTCCAGAA CTATCAGCTC AACATTGCCG AACTGTTCAT CAAAACCGGT
AAATACAAGG AAAGTATCGA TACGCTCAAC GTTGCTGTCA ATTACCATCC CATCACCGAA
GCAGACGACC TCAGTTACGT ATACCGGCAA TACCTGCGCT TATACCTGGC CCTGCACGAC
TACCACAAAG CAAATACCTG GTACCAGAAA ATACTGCAAC TCTATAATAG CGACAAAGCT
TCCGCATATG AAAAAACGGT ATCCTCTGCT TACCTATCTT TGTATCTTGT AGAAACAGGT
CGCTTCCGGG AAGCGGCAAC GTACCTGAAT AGCGCTGCCA CACAACAGAT TTCATCCGTA
CAGGGCAACG CTATGCTGGA ACGCCTCCGC TACAGAACGG ATTCGGCACT GGGTAATCTG
GCTGGCGCTA TTGCACACTT TCAGCAGTAT ACCGTCTTAT CAGATTCACT GAATAGCGTG
GCACAGACAA GACAGCTGGG GCAACTGCAA TTGCAGTTTG AAACTGAAGA AAAGGATAAA
GACATTCTGC TGCTGACACA GAAAAGTCAG CTACAGGCCA GCTCCCTGGA AAAGGAGATC
ATGATCCGGT ACCTGATCAT CGGCGGGATA TTAGTCCTGA TCGTTTTTCT TGTATTGGTC
TACAACCGCT ACAGAAGTAA TAAGCGGACC AACATCAAAC TGGAAGGTCA GCAGCTGGAG
ATCAACGAAC AGAATGAAAC ACTGAAGGCA CTGCTCGATG AAAAAGAATG GTTGCTGAAA
GAAATACATC ACCGGGTAAA GAATAACCTG CAGATTATTA TCAGTCTGCT GAACACACAA
TCGCAATACC TGAACAATGA AGATGCACTG GCAGCCATCC GCAACAGCCA GCAACGGATG
TACTCCATGT CGCTTATTCA CCAGCGCCTG TATCAGACAG AAAACCTCGG AAAGATAGAC
ATGAACTGGT ACATTCCCGA AATGATCACC TACATCAGGG ATAGCCTGGA TACAAACGCG
CATATCACCT TCAAAGTGGA TAGCGATCAT GTGGCGCTGG ATGTAGCAGA AGCAGTACCA
CTCGGACTCA TTCTGAACGA AGCCGTCAGC AATGCATTGA AATACGCCTT TCCCCATCAG
ACCAAAGGCA ACATTGAAAT CAGTTTTAAA GCCACTCAGG ACGGCAATTG CTTCCTGGAT
ATCAGTGACA ACGGCGTCGG TATTCCCGAA GGGAAAAACA TCGCCGAATC CGCCTCTCTT
GGTATGAGCC TGATGCAGGG ACTCAGCCTT CAGCTGGATG GTACATTTAC ACTGTCCGAC
AATCATCCGG GCGTATCCAT TACGGTCGCC TTCAGATGCA AGGAATTTAT ATCGAACGAA
AATATACATA CACACACCTG A
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| Protein sequence | MSGIRYILSI SFLLLTVCGR SHATVFLSGE DERSAAIATI HTLWQQGDRI LAKPHPLTAD
CDSAKHISQK MATLSRRFNY DQGLGLSQQL MSAALRYNNQ GNEAIAYAME AVDILSKAGT
EKQKADAFIE LAGCYSNADT DLPVKISLYE KGARSYHQLG DKVREAALLE MIGDLYQLKK
DYTTALSRLK QSLALYQSAG FQRLQGVYAL IGTVCNEQNN FVEGLRYNML AVQTGEQVKD
TSQLMATVYH RLGMSYHSIN YTRQALEYYK KALLLAYQLN DSAAVQNYQL NIAELFIKTG
KYKESIDTLN VAVNYHPITE ADDLSYVYRQ YLRLYLALHD YHKANTWYQK ILQLYNSDKA
SAYEKTVSSA YLSLYLVETG RFREAATYLN SAATQQISSV QGNAMLERLR YRTDSALGNL
AGAIAHFQQY TVLSDSLNSV AQTRQLGQLQ LQFETEEKDK DILLLTQKSQ LQASSLEKEI
MIRYLIIGGI LVLIVFLVLV YNRYRSNKRT NIKLEGQQLE INEQNETLKA LLDEKEWLLK
EIHHRVKNNL QIIISLLNTQ SQYLNNEDAL AAIRNSQQRM YSMSLIHQRL YQTENLGKID
MNWYIPEMIT YIRDSLDTNA HITFKVDSDH VALDVAEAVP LGLILNEAVS NALKYAFPHQ
TKGNIEISFK ATQDGNCFLD ISDNGVGIPE GKNIAESASL GMSLMQGLSL QLDGTFTLSD
NHPGVSITVA FRCKEFISNE NIHTHT
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