| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4850 |
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| Symbol | |
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| ID | 8361026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6064789 |
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| End bp | 6065577 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967000 |
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| Product | two component transcriptional regulator, AraC family |
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| Protein accession | YP_003124485 |
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| Protein GI | 256423832 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00623766 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAGACA CACTATTAAT AGTGGATGAC AACAAGGACA TATTACAGCT GCTGTCCAGG
GACCTGGGGA AGGACTACCT CGTCGTTACC GCTCAAAACG GCCAACATGC GCTTGAAATG
ATAGAAAATC ATCCTGTCCG CATCATCATC TCAGATATGC AGACGCCGTT GCTCAGTGGT
TTTGACCTTT GTCAGCACGT CAAAACAAGC CTGCACTACG CGCATATTCC TGTTATTCTT
CTGACGGCAG GAAAAAGGTT GCAATCCCAG TTAGATGGAC TGAAAGCAGG TGCCGATGCC
TGTATTGATA AACCCTTTTC CTCCGAACAC CTGAAGGCCC AGATCAATAG CTTGCTGAAC
AACCGGAAAA AGATCAGGGC CTATTACACC CGCTACCCAC AGGGCCATAT CGCAACTGCC
CATTGTCCCA AACCGGAAGA AGACTTTCTC GCTGCATTAA ACAGCCTTAT TCTCGACAAT
ATCGAAAACA CGGCCCTGGA TGTAGACCTG CTGGCAAAAC TGCTGAACAT CAGCCGCCCT
ACCCTTTACA GGAAGATCAA GGCGCTGTCT GATATGACGC CCAATGAACT CGTCATGGAA
ACCAGACTGA AAAAAGCAGT CGAATTACTG ACAGGTACGG GGTATAAAAT ATTTGAAGTT
GCCCTGATGA CCGGATTCAA TTCCCAGAGC AGTTTTGGCA AGGCTTTTCT CCGGCAGTTC
AAGATGACGC CTACCGCTTT TCAACAGATC AGAAAAAAAG ATGGAATCCT CCGGACATCC
TTTTTATAG
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| Protein sequence | MQDTLLIVDD NKDILQLLSR DLGKDYLVVT AQNGQHALEM IENHPVRIII SDMQTPLLSG
FDLCQHVKTS LHYAHIPVIL LTAGKRLQSQ LDGLKAGADA CIDKPFSSEH LKAQINSLLN
NRKKIRAYYT RYPQGHIATA HCPKPEEDFL AALNSLILDN IENTALDVDL LAKLLNISRP
TLYRKIKALS DMTPNELVME TRLKKAVELL TGTGYKIFEV ALMTGFNSQS SFGKAFLRQF
KMTPTAFQQI RKKDGILRTS FL
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