Gene Cpin_4847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4847 
Symbol 
ID8361023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6057713 
End bp6059626 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content52% 
IMG OID644966997 
Productprotein of unknown function DUF303 acetylesterase putative 
Protein accessionYP_003124482 
Protein GI256423829 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.277703 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00343122 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGCGCT ATCGCTATCT GATCGCCGGC GCATTGCTCT TCTCCCTGTT ACATGCCCGT 
TCAGTGGCAC AGGTAAGACT CCCCCGGCTT GTAAGCGACA GCATGGTGCT GCAGCGCAAT
ACACCGGTAC AGCTTTGGGG ATGGGCCTCT CCGCAGGAGA AGATCCGGAT AACATTCCGG
GGGAAACAAA TCAGGACTAC CGCAGGATCG GACGGAAAAT GGTCTGCCAC CATCCCGGCC
ATGAGTCATG GAGGTCCCTT TACCATGGAC ATCAAAGGGA AAAACCATAT CATCCTCCGG
GATATCCTAG TGGGTGACGT ATGGCTTTGC GCCGGACAAT CCAACATGGT GCATCAGATG
ACCCTGCACA GTGAACGTTA TGCCTTTGAC ATAACCAATG CCAACTTCCC GGAAATCCGG
CACTTTAAAA TTCCGCAGAC GACGAATCTG AAAGCACCCT CCGATGATTT GTCAGCCGCT
TACTGGAAAT CAGCCACGCC CACAGACGTG GCTGATTTTT CTGCGGTAGC CTACTTCTTT
GCCCGCAATC TCTACCAGCG TTATCATGTA CCCGTCGGAT TAATCAACGC ATCTGTCGGA
GGTACGCCCA TTGAAGCCTG GACCAGCAAA GAAGGACTCA AGGACTTCCC TGACATACAG
ACGTCCATCC GAAATAATGA AACTATTACG CCGCCTCCTG CACCAGCGGT ACCGGAACCA
GCTGACGCAG GACTGGACAA TCACCCCGCA TGGTACGACC CGGCCTATAC CCCCCAACAC
TGGCATCCTT TCACCTTGCC CGGCTACTGG AATGACCAGG GCGTCCGGGA ACTGAATGGC
ATTGTCTGGT TCCGGCGGGA AATTGATATA CCGGCGACCA TGACGGATAC ATCCGCCATG
CTTCGCCTGG GCAGAATCGT TGATGCGGAT GTCGTATATG TAAACGGACA AAAGGTCGGT
AATACCTCCT ATCAGTATCC CCAACGACGT TATACGCTGC CGGCAGGCAT CCTGAAACCT
GGTAAAAACC TGATCGTGGT ACGGATAACG AACACCGCAG GTAAAGGTGG ATTCATACCG
GATAAACCTT ATTACCTGGC TGCCGGCAAT GACACACTCG ACCTCAAAGG CGACTGGTTA
TACAAAGTAG GCGGCGTTTA CCAGGCGCCT CCGCCACAAA CAACTTTCAG AGAAACGAAC
TGTCCTGCCG CACTGCATAA TGGGATGCTC GCCCCCATTA TTCCTTATAC GATCAAAGGT
GCTTTATGGT ACCAGGGTGA AAGCAACATG GGCAATCCAC AGGAATACAG CCGTCTCCTA
CCCGCCCTGA TCAATGACTG GCGAAACAAA TGGCACAACC CTGCATTGCC TGTGCTCTTT
GTACAACTTC CGGGTTTCCT GGAAGTACAA TACCTGCCTT CCGAAAGTAG CTGGGCCACC
CTCAGGGAAT CACAGCGCAA AAGCGGGTCT CTGCCGCATA CCGCTATGGC AATTGCGATA
GATCTGGGAG AATGGAATGA CGTGCATCCG GACAGAAAAA AGGAGGTAGG CGACCGGCTG
GCTTTACTCG CCAGGAAAAT GGTCTATGGT GAAGAACAAC TGGTGGCCAG TGGACCGCTG
GCGGAAAAGG CGAATATCAG CGATAATAAA GTAGTGATAA CTTTTACAGA TACCGGTAGT
GGTCTGATCA CCAGTGACGG TCTTACACCC GGACAGTTTG CTATTGCCGG AAAGGACGGA
AAATTTGTAT GGGCACAAAC AAAACTGGAA GGAAATAACG TGATCATATG GTCGCCGGAA
GTAGTAGCGC CGGTACGTGT ACGGTATGCC TGGGCAGACA ATCCTGACAA TCCTAACTTA
TATAACAGGG AAGGCCTCCC GGCCTCCCCT TTCGAATTGA ATATAGATCT ATGA
 
Protein sequence
MMRYRYLIAG ALLFSLLHAR SVAQVRLPRL VSDSMVLQRN TPVQLWGWAS PQEKIRITFR 
GKQIRTTAGS DGKWSATIPA MSHGGPFTMD IKGKNHIILR DILVGDVWLC AGQSNMVHQM
TLHSERYAFD ITNANFPEIR HFKIPQTTNL KAPSDDLSAA YWKSATPTDV ADFSAVAYFF
ARNLYQRYHV PVGLINASVG GTPIEAWTSK EGLKDFPDIQ TSIRNNETIT PPPAPAVPEP
ADAGLDNHPA WYDPAYTPQH WHPFTLPGYW NDQGVRELNG IVWFRREIDI PATMTDTSAM
LRLGRIVDAD VVYVNGQKVG NTSYQYPQRR YTLPAGILKP GKNLIVVRIT NTAGKGGFIP
DKPYYLAAGN DTLDLKGDWL YKVGGVYQAP PPQTTFRETN CPAALHNGML APIIPYTIKG
ALWYQGESNM GNPQEYSRLL PALINDWRNK WHNPALPVLF VQLPGFLEVQ YLPSESSWAT
LRESQRKSGS LPHTAMAIAI DLGEWNDVHP DRKKEVGDRL ALLARKMVYG EEQLVASGPL
AEKANISDNK VVITFTDTGS GLITSDGLTP GQFAIAGKDG KFVWAQTKLE GNNVIIWSPE
VVAPVRVRYA WADNPDNPNL YNREGLPASP FELNIDL