Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4847 |
Symbol | |
ID | 8361023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6057713 |
End bp | 6059626 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644966997 |
Product | protein of unknown function DUF303 acetylesterase putative |
Protein accession | YP_003124482 |
Protein GI | 256423829 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.277703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00343122 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGCGCT ATCGCTATCT GATCGCCGGC GCATTGCTCT TCTCCCTGTT ACATGCCCGT TCAGTGGCAC AGGTAAGACT CCCCCGGCTT GTAAGCGACA GCATGGTGCT GCAGCGCAAT ACACCGGTAC AGCTTTGGGG ATGGGCCTCT CCGCAGGAGA AGATCCGGAT AACATTCCGG GGGAAACAAA TCAGGACTAC CGCAGGATCG GACGGAAAAT GGTCTGCCAC CATCCCGGCC ATGAGTCATG GAGGTCCCTT TACCATGGAC ATCAAAGGGA AAAACCATAT CATCCTCCGG GATATCCTAG TGGGTGACGT ATGGCTTTGC GCCGGACAAT CCAACATGGT GCATCAGATG ACCCTGCACA GTGAACGTTA TGCCTTTGAC ATAACCAATG CCAACTTCCC GGAAATCCGG CACTTTAAAA TTCCGCAGAC GACGAATCTG AAAGCACCCT CCGATGATTT GTCAGCCGCT TACTGGAAAT CAGCCACGCC CACAGACGTG GCTGATTTTT CTGCGGTAGC CTACTTCTTT GCCCGCAATC TCTACCAGCG TTATCATGTA CCCGTCGGAT TAATCAACGC ATCTGTCGGA GGTACGCCCA TTGAAGCCTG GACCAGCAAA GAAGGACTCA AGGACTTCCC TGACATACAG ACGTCCATCC GAAATAATGA AACTATTACG CCGCCTCCTG CACCAGCGGT ACCGGAACCA GCTGACGCAG GACTGGACAA TCACCCCGCA TGGTACGACC CGGCCTATAC CCCCCAACAC TGGCATCCTT TCACCTTGCC CGGCTACTGG AATGACCAGG GCGTCCGGGA ACTGAATGGC ATTGTCTGGT TCCGGCGGGA AATTGATATA CCGGCGACCA TGACGGATAC ATCCGCCATG CTTCGCCTGG GCAGAATCGT TGATGCGGAT GTCGTATATG TAAACGGACA AAAGGTCGGT AATACCTCCT ATCAGTATCC CCAACGACGT TATACGCTGC CGGCAGGCAT CCTGAAACCT GGTAAAAACC TGATCGTGGT ACGGATAACG AACACCGCAG GTAAAGGTGG ATTCATACCG GATAAACCTT ATTACCTGGC TGCCGGCAAT GACACACTCG ACCTCAAAGG CGACTGGTTA TACAAAGTAG GCGGCGTTTA CCAGGCGCCT CCGCCACAAA CAACTTTCAG AGAAACGAAC TGTCCTGCCG CACTGCATAA TGGGATGCTC GCCCCCATTA TTCCTTATAC GATCAAAGGT GCTTTATGGT ACCAGGGTGA AAGCAACATG GGCAATCCAC AGGAATACAG CCGTCTCCTA CCCGCCCTGA TCAATGACTG GCGAAACAAA TGGCACAACC CTGCATTGCC TGTGCTCTTT GTACAACTTC CGGGTTTCCT GGAAGTACAA TACCTGCCTT CCGAAAGTAG CTGGGCCACC CTCAGGGAAT CACAGCGCAA AAGCGGGTCT CTGCCGCATA CCGCTATGGC AATTGCGATA GATCTGGGAG AATGGAATGA CGTGCATCCG GACAGAAAAA AGGAGGTAGG CGACCGGCTG GCTTTACTCG CCAGGAAAAT GGTCTATGGT GAAGAACAAC TGGTGGCCAG TGGACCGCTG GCGGAAAAGG CGAATATCAG CGATAATAAA GTAGTGATAA CTTTTACAGA TACCGGTAGT GGTCTGATCA CCAGTGACGG TCTTACACCC GGACAGTTTG CTATTGCCGG AAAGGACGGA AAATTTGTAT GGGCACAAAC AAAACTGGAA GGAAATAACG TGATCATATG GTCGCCGGAA GTAGTAGCGC CGGTACGTGT ACGGTATGCC TGGGCAGACA ATCCTGACAA TCCTAACTTA TATAACAGGG AAGGCCTCCC GGCCTCCCCT TTCGAATTGA ATATAGATCT ATGA
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Protein sequence | MMRYRYLIAG ALLFSLLHAR SVAQVRLPRL VSDSMVLQRN TPVQLWGWAS PQEKIRITFR GKQIRTTAGS DGKWSATIPA MSHGGPFTMD IKGKNHIILR DILVGDVWLC AGQSNMVHQM TLHSERYAFD ITNANFPEIR HFKIPQTTNL KAPSDDLSAA YWKSATPTDV ADFSAVAYFF ARNLYQRYHV PVGLINASVG GTPIEAWTSK EGLKDFPDIQ TSIRNNETIT PPPAPAVPEP ADAGLDNHPA WYDPAYTPQH WHPFTLPGYW NDQGVRELNG IVWFRREIDI PATMTDTSAM LRLGRIVDAD VVYVNGQKVG NTSYQYPQRR YTLPAGILKP GKNLIVVRIT NTAGKGGFIP DKPYYLAAGN DTLDLKGDWL YKVGGVYQAP PPQTTFRETN CPAALHNGML APIIPYTIKG ALWYQGESNM GNPQEYSRLL PALINDWRNK WHNPALPVLF VQLPGFLEVQ YLPSESSWAT LRESQRKSGS LPHTAMAIAI DLGEWNDVHP DRKKEVGDRL ALLARKMVYG EEQLVASGPL AEKANISDNK VVITFTDTGS GLITSDGLTP GQFAIAGKDG KFVWAQTKLE GNNVIIWSPE VVAPVRVRYA WADNPDNPNL YNREGLPASP FELNIDL
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