| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4839 |
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| Symbol | |
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| ID | 8361015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6045553 |
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| End bp | 6046695 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644966989 |
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| Product | FAD dependent oxidoreductase TIGR03364 |
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| Protein accession | YP_003124474 |
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| Protein GI | 256423821 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR03364] FAD dependent oxidoreductase TIGR03364 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0215652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000104965 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACAGC AAAAAGCTAT CGTTATAGGC GCAGGCATCG TAGGTATTGC AACTGCCAGA
GCACTCGCGC TAAAAGGTTT TGAAGTCGAG GTATTCGAAA GGGACGAACG TGCAGTGGGC
GCTTCCATCC GGAATTTCGG GATGATATGG CCCATCGGTC AGCCATCAGG AAGACTGTAT
AATAGAGCCA GGCGCTCCCG CGAAATATGG CAATCCATCT GTGAAGAAGC CGGCATCTGG
CACGACCCGG TCGGATCTTT ACACCTGGCT TACCATGACG ACGAACTACA GGCGATCCGC
GAATATGTAG CCGCTAATGC TGCCGAACGT GGCTGTACAC TCCTGACGCC GGCTGAAGCA
TTAGAGAAGT CTGCATCCAT CAACCCCGAA GGATTACTCG GCGCACTCTG GAGCCCGGAC
GAAATGATCG TTGAAGCAAG GGAAGCAATC GGACAAGTAG CCGCCTTCCT GGAAAAGAAA
TATCATATCC GTTTTCACTG GCATACCGCC ATCCATAAAA TCAGCTATCC CGCCGTCTAT
TCGGGCGACC GGCAATGGGA AGCCGACAGG ATCTATGTAT GCAGTGGCGT AGACTTTGAA
ACGCTGTATC CTGACACCTT CCGTCAACTG AGTCTGACCA AATGCAAATT ACAGATGATG
CGTGCTGCTG CCCTACCTGA AAAACAGCGT ATAGGCCCAT CGCTTTGCGG CGGATTATCC
ATGGTGCATT ATCCTGGTTT TCAGTCTGCC GCCTCACTGC CTGCTCTGAA AAACCGTTAC
CAGCAACAAT ACGCAGAAGA ATTGAAATGG GGTATTCACG TGATGGTATC GCAGAACCAA
TACGGAGAAC TTACCATCGG CGATTCTCAT GAATATGGTC TCACCCATGA TCCATTCAGC
CGGGGTTTTA TCGACCAGAT GATCATCCGC TACCTCGGTA CATTCACACA ATTACAATCA
TCACAGATCA TCCAGCACTG GGTCGGCTTC TATCCAAAGA TGACAAACGG CAACACAGAA
CTGATACTCA GTCCGGAAAA AGGTGTCACC ATCATCAACG GCGTCGGCGG TAACGGTATG
ACGCTGTCCT TCGGACTCGC AGAAGAAGTG ATCAACGGAG AGATCTCTGT CAGCACTCTG
TAA
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| Protein sequence | MTQQKAIVIG AGIVGIATAR ALALKGFEVE VFERDERAVG ASIRNFGMIW PIGQPSGRLY
NRARRSREIW QSICEEAGIW HDPVGSLHLA YHDDELQAIR EYVAANAAER GCTLLTPAEA
LEKSASINPE GLLGALWSPD EMIVEAREAI GQVAAFLEKK YHIRFHWHTA IHKISYPAVY
SGDRQWEADR IYVCSGVDFE TLYPDTFRQL SLTKCKLQMM RAAALPEKQR IGPSLCGGLS
MVHYPGFQSA ASLPALKNRY QQQYAEELKW GIHVMVSQNQ YGELTIGDSH EYGLTHDPFS
RGFIDQMIIR YLGTFTQLQS SQIIQHWVGF YPKMTNGNTE LILSPEKGVT IINGVGGNGM
TLSFGLAEEV INGEISVSTL
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