| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4810 |
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| Symbol | |
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| ID | 8360986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5998062 |
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| End bp | 5999486 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966960 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_003124445 |
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| Protein GI | 256423792 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0244404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000000137556 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAATG ATTTCTTATA CATAGAGATA TCCAATCAGC TCGGTGAACT CATAAAGAAA
CAGATCCTGC AACCGGGAGA TCGCCTGCCC TCCGTCAGAA ATCTCTGCCA GGAATACGGT
ATCAGTATGA ATACCGCCAA AAGGATCTTT CTCGAACTGG AAGCGCAATC ACTGATTGAG
TCTATTCCAC AATCTGGATA CTATGTATGC CGGCAACCGG TTCGCAGACT TCCCCTACCC
GATATCAGCA ATCCTTCGGG AAAAATCAGC AATAAAGAAC CGGAAGAACT GATCAGCAGG
GTCTATGCCA ATATCGGCAA CACCGCATTG ACACGTTTCT CTGTAGGTGT ACCTGCCAAT
GAGCTATTAC CATTAGCAAA ACTCAATAAA GAACTAATCA ACGCAACAAG AAACCTGGCC
GACGGTGGTA CCGCCTATGA GACACTACAG GGCAATGAGA AACTGAGAAG AGCCGTTGCC
GCCCGTTCTA TCTATTGGGG CGGTAACCTG CAGGAAGTCG ACCTTGTTAC TACCGCCGGC
GGCATGAATG CCCTTTCCTT TTGTATGATG GCACTGGCAA AAGCCGGAGA TACCATTGCG
ATAGAAAGTC CCTGTTATCC CGGCACCCTC CAACTCGCTA AAAGCCTTGG ATTAAAAGTC
CTGGAATTAC CGACGCATCC CATCACCGGT ATCGAAATAG CAGCATTAAA AAAAGTCGTT
ACCAAAATTA ATCTCTGTCT ACTGGTCCCT AATTTCAATA CACCTCTCGG CAGCTACATG
CCGGAAGAAA ACAAGCAAGC AATCGTCCAT CTCCTTGCTG AGCATAAGGT ACCACTCATA
GAAGACGATA TCTATGGCGA CCTTTATTTC AGCGGACACC GCCCCTCCTG TTGTAAGGCA
TTTGACACCG AAGGAATGGT GCTCTGGTGC AGCTCTGTTT CTAAAACACT CGCACCGGGC
TATCGTGTAG GTTGGGTGGC TCCCGGAAAA TTCAAAGACA AAATATTAAA GCTGAAGCTG
GTGCACGCCA TCTCTGCTCC TGCCATCACA CAGGAAGCAG TCGCTAATTT TCTCACAAGC
GGACATTATG AAAATCATCT CCGGCAATTC AGAAGGATAT TACACAGCAA TTATCAGCAT
TATACAGAAA GCATTGCCGC ATATTTCCCG GAGGGTACAA AGACCAGCAG ACCGCAAGGA
GGCCTCTCCA TCTGGGTGGA GTTTGATAAA GGGATTAACA CGACGGAACT GTTCGAACTG
GCTATGAAAC AGAAAATAAG TATTGCCCCA GGGAGGATGT TTTCTTTACA GGATCAGTTT
GAAAACTGTA TGCGACTGTC TATCGGACTA AGCTGGTCCG AAGACCTCAA ACGGAAACTA
AAACTCCTTG GGAACCTCGC AAAACAAATC AAAGCTTCCC GATAA
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| Protein sequence | MKNDFLYIEI SNQLGELIKK QILQPGDRLP SVRNLCQEYG ISMNTAKRIF LELEAQSLIE
SIPQSGYYVC RQPVRRLPLP DISNPSGKIS NKEPEELISR VYANIGNTAL TRFSVGVPAN
ELLPLAKLNK ELINATRNLA DGGTAYETLQ GNEKLRRAVA ARSIYWGGNL QEVDLVTTAG
GMNALSFCMM ALAKAGDTIA IESPCYPGTL QLAKSLGLKV LELPTHPITG IEIAALKKVV
TKINLCLLVP NFNTPLGSYM PEENKQAIVH LLAEHKVPLI EDDIYGDLYF SGHRPSCCKA
FDTEGMVLWC SSVSKTLAPG YRVGWVAPGK FKDKILKLKL VHAISAPAIT QEAVANFLTS
GHYENHLRQF RRILHSNYQH YTESIAAYFP EGTKTSRPQG GLSIWVEFDK GINTTELFEL
AMKQKISIAP GRMFSLQDQF ENCMRLSIGL SWSEDLKRKL KLLGNLAKQI KASR
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