Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4776 |
Symbol | |
ID | 8360952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5950278 |
End bp | 5950613 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644966927 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003124412 |
Protein GI | 256423759 |
COG category | [K] Transcription |
COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0811435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.544838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACAG GTAAAATCAT TGCCGATCTC AGAGATAAAT TAGCATGGTC GCAAACCGAC CTAGCAGATA AAAGCAGCGT ATCCAGGGTG ATGATCGGGA AGTATGAACG CGGGGAAGCC GTACCGTCCA TTGATGCTGC TAAAAGGATT GCAGATGCGC TGGGGGTTAG TCTGGACTAC CTGGTAGGTG AAGGGATAAA TGCCCGGTTT GATAAAAAGA CGCTGAAGCG GCTGGAAGAA CTTGAGTTGC TGGAAGAGGA TAAGAAACGG ATACTCTATG ATCTGATTGA TACGTATATC AGAGATGCGA AAGCCAGAAA GGCATATGCG CAATAA
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Protein sequence | MNTGKIIADL RDKLAWSQTD LADKSSVSRV MIGKYERGEA VPSIDAAKRI ADALGVSLDY LVGEGINARF DKKTLKRLEE LELLEEDKKR ILYDLIDTYI RDAKARKAYA Q
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