| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4759 |
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| Symbol | |
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| ID | 8360935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5934015 |
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| End bp | 5935310 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966910 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003124395 |
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| Protein GI | 256423742 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000435515 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.179343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAAGTG TGTCATTAAA CGGTTATATA TCCCGGGTCA GGAATTCGGT TTTTTTAAGG
AATGTCTCTA CACTGGCAGC AGGCACTGTA TTGAGTCAGC TGATCATTTT CGGAGCTTCT
CCTTTTCTGA CAAGGATCTA TAGCCCGGTA GATTTTGGTG TACTGGCGCT GTTTACCAGC
GTCAGTATGC TGGCTGCCAT CCTCAGTACC GGCAGGTATG AGCTGGCAAT CGGCTTGCCT
GAACAGGATG ATGAAGCCAT TAATGTAGTT GCGCTGACCG TGTTGAATTC ATTCATCATG
GCGCTGTTTT ACGTCCTGCT GATTCTTGTA TTAAGACAGA GCAGCTGGTC CGTATTACAA
TCATCCTCGC TGCTGCATCA GCCAGTCATA TTCCTGGTGC CGGTCTACAC CTTTATGACA
GCCGCTTTTT CATCGCAGAC CTACTGGAAT CAACGGCGGA AGTCTTACAA GGAGATTTCC
ACCTCATTAG TGACACAGGC AGTCGTAGCT ACCGCCATCA ACATCATCCT GGGGCTTATC
GGTTTAAGTG CCTGGGGCCT GATAGCGGGA TTGCTGATGG GACAGCTGGG CGCCAATTTA
TTTCTGCTGG TGAAAATGAT CCGGGAAAAT AGTTTCCGGG GAGTAAAAGC CGCCAGGATC
AAAGAAGTAG CCATACGCTT TGTCAACTTT CCGAAGTTCA TGACATTCTC GGGCGTATTG
CTCACCACTT CTCAACAGGT CGTGCCGATT ATCTTTTCAT TCCTTTTCAA TGCGGTAGTA
GTAGGTTTCT TTTCCCTGGC CAACAGGATG CTGCGGGTGC CCAATATCGT ACTGACCACC
TCCATCGGGA ATGTGTTCAG GAACGATGCG ATCGACAGCA TCCGGGACAA GGGGAGTTGC
GACCAGCTGT TTAAGGCGAC GCTGCGTAAG CTGACCTTAC TGTCGGTGCC TATTTACCTC
GTGCTCTGGA TCGTATCGCC TTTTTTGTTC GTGATCTTCT TTGGCAAAGA CTGGGAGTCT
TCCGGTTATT TCGCCAGGAT CATCTGTATC ATGCTGGCGC TTGATTTCAT TGCAACGCCA
TTGAGCACTT TGTTCAATGT GATCGGCCGG CAGAAGGCAT ATATGCGCCT GCAACTGTGT
AATACGGTGA TCGGTGTCGG GGCATTATGG GCAGGTGCGA AGTTCTTTAA CGACGCGTAT
ATGTCTATCA GCCTGTTTAC ACTCAGTAAC TGTGTGTTCA GCCTGGTAAG CATCTACATC
ACTTATCAGT ACTCTAAAGA GCAATATAAA ATCTGA
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| Protein sequence | MKSVSLNGYI SRVRNSVFLR NVSTLAAGTV LSQLIIFGAS PFLTRIYSPV DFGVLALFTS
VSMLAAILST GRYELAIGLP EQDDEAINVV ALTVLNSFIM ALFYVLLILV LRQSSWSVLQ
SSSLLHQPVI FLVPVYTFMT AAFSSQTYWN QRRKSYKEIS TSLVTQAVVA TAINIILGLI
GLSAWGLIAG LLMGQLGANL FLLVKMIREN SFRGVKAARI KEVAIRFVNF PKFMTFSGVL
LTTSQQVVPI IFSFLFNAVV VGFFSLANRM LRVPNIVLTT SIGNVFRNDA IDSIRDKGSC
DQLFKATLRK LTLLSVPIYL VLWIVSPFLF VIFFGKDWES SGYFARIICI MLALDFIATP
LSTLFNVIGR QKAYMRLQLC NTVIGVGALW AGAKFFNDAY MSISLFTLSN CVFSLVSIYI
TYQYSKEQYK I
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