Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4748 |
Symbol | |
ID | 8360924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5921812 |
End bp | 5922735 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644966899 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003124384 |
Protein GI | 256423731 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000104829 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0341268 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAT CTTTGCTATT AACCGGCGCT TCCGGTTTTC TGGGCACGGA GATCCTGCAT ACACTACGAT CTGAATACGA AGTAACAACT ATAGGCCGTA ATGGTCCTGA ATACGGACAG ACGAGTCATA TGAAGATGGA TCTTTCCAGG GAGAAAACAA GAGAACTGCC GGCGTGTGAG GTGGTGGTGC ATTGTGCCGG GAAGGCGCAT GTAGTACCCG CTTCACCAGA GGAGGCAGAC GAGTTTTATA AAGTGAATTT ATATGGTACG GTGCATCTGT GCGAGTCACT GGAGGCATCG GATGCCATTC CTGTTTATTT TGTGTTTATC AGTACTGTTG CGGTGTATGG CGTCGATGAA GGAGTGCTGA TCAATGAACA GCATCCCTTG AATGGCGATA CGCCTTATGC AAGAAGTAAG ATCCAGGCAG AGCATTACCT GACGGAATGG TGTGGCCAGC GGGATGTACA GCTATTGATA TTAAGGTTGC CGCTGATTGC TGGTCCGGAG CCACCAGGCA ACCTGGGCGC TATGATACGC GGCATTGCTT CCGGCAGGTA CCTGAGCATT GGAGATGCAG CGGCACGCAA GAGCGTTGTA TGGGCCGGAG ATGTAGCAGC TGTGATACCA GTAGCGATGA AGGAGGGAGG GGTGTATAAT CTGACAGATG GGTATCATCC AAGTTTCAGG GAACTGGAAA CCTGTATCGC GACAGCGCTA AAGAAAAAAG TTCCTTCTGC CATACCGATG GGAATGGCAA AAATGATTGC GGGTGTGGGG AATCTGTTGG GAAAGCGAGC GCCGGTAAAC AGTGATAAAC TACGTAAAAT TACTTCCACA TTGACCTTTG ACGACGGGAA AGCAAGACGT GCATTCAACT GGCAGCCTTC CCGGGTTATT GATAAGTTAT CGTCTGTATT ATGA
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Protein sequence | MKASLLLTGA SGFLGTEILH TLRSEYEVTT IGRNGPEYGQ TSHMKMDLSR EKTRELPACE VVVHCAGKAH VVPASPEEAD EFYKVNLYGT VHLCESLEAS DAIPVYFVFI STVAVYGVDE GVLINEQHPL NGDTPYARSK IQAEHYLTEW CGQRDVQLLI LRLPLIAGPE PPGNLGAMIR GIASGRYLSI GDAAARKSVV WAGDVAAVIP VAMKEGGVYN LTDGYHPSFR ELETCIATAL KKKVPSAIPM GMAKMIAGVG NLLGKRAPVN SDKLRKITST LTFDDGKARR AFNWQPSRVI DKLSSVL
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