Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4691 |
Symbol | |
ID | 8360865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5850492 |
End bp | 5850953 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644966842 |
Product | hypothetical protein |
Protein accession | YP_003124329 |
Protein GI | 256423676 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.306809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00137865 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAGAAA AACCCTTAAA GGAAGGCTTA ACCGCTTTGC TGGTGTCCTT ATTTGCTTAT GCCGGCGTAT CCATACTGCT CGACTATGAG CTTTTCAGAA ACCACCTGAT ATTGTCGCCG TGGCCACTGT TATCGTATAC AGCCCCTTAT ATGGCAGGTA CATTACCGGT GATAGAATTG CTGATTGCCA TCATGCTTAT CATGCCGCGG ACACGGATCA GCGGATTATG GATGGCGTTT ATGACGATGC TGGCCTTTAC CGCCTATGTA GCTGTGTTTT TATTGTCTGA CAGGAAACTC CCCTGCAGCT GTAGTGGCGT GTTCAGTTTC ATGGACTGGG AATGGCACCT CTTGTTCAAT ATTATTTTTA CCATGCTCGC AGAAACTGCG CTTTTTCTTC ATATACCGCT TCCTATAGAT TTCACATCCA TTTTTAAACA TAAAAAACAA TATCTCCAAT GA
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Protein sequence | MSEKPLKEGL TALLVSLFAY AGVSILLDYE LFRNHLILSP WPLLSYTAPY MAGTLPVIEL LIAIMLIMPR TRISGLWMAF MTMLAFTAYV AVFLLSDRKL PCSCSGVFSF MDWEWHLLFN IIFTMLAETA LFLHIPLPID FTSIFKHKKQ YLQ
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