| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4688 |
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| Symbol | |
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| ID | 8360862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5845429 |
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| End bp | 5847996 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966839 |
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| Product | hypothetical protein |
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| Protein accession | YP_003124326 |
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| Protein GI | 256423673 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00169817 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCTAT ATAGACTTTT TACCACGCTG GCTGTTCTGG CAATTTCCAC GGTGCAGGCA
CAAAGCCCTG CCGGCGACAG TATTACGGTC GCTATTTCTC CTGCCTATGA CAGTGTGAGT
GGCTTACACC GGACGCTGTT TGGTGAGAGC TATCGTAAAT TATGGGCCGC GCCGGTGAAG
ATGAAAGTCT TTTACCTGGA GAAAGAAAAA GGTGGACTGA TCATCGAACA GAGAGGTGGA
GGTCTGCAAA CCAAGTCACT TCGTTTAAAG GACAAGGAAG GGCATGAATG GGTGCTCCGT
ACGATTCAGA AATACCCGGA AAGAGGATTG CCCCCCAATC TGCGGGCAAC CATCACCAAA
GACATCCTCC AGGACCAGGT AGTCACCGCA CATCCCTATT CCTCGCTGAC AGTACCTCCG
CTGGCAGCTG CCCTGGGGAT TCCTCATGCC AATCCACAGA TCGTATATAT TCCTGATGAT
CCTGCGTTGG GCGAATACAG GAAAGACTTT GCCAATGCGG TTTTCCTCTT TGAAGAAAGA
GAGCCTGAAG ATGCCGAGCG TACAGACAAT ACCGAAAAAA CACAGCGCAA GCTGGAAGAA
GATAATGACG TGCATGTCTA TCAGCAGATC GTGTTAAGAG CCCGTTTGCT GGATATGTTG
CTGGGTGACT GGGACCGTCA CGAAGACCAG TGGCGCTGGG AAAGAGTAAA GGAAGATAAA
CGCGTGGATT ACACACCTGT ACCGCGTGAC AGGGACCAGG TATACTACAA TACCACCGGT
CTTTTTCCCT GGATCATTTC TCACCAATGG CTGAAATCCA AGTTCCAGGG CTATCATGAT
CATATCAGGG ATATCAAGGG TTTTAATTTC AACGCCCGTT ACTTTGACCG CTACTTCCTG
AATGGCCTCA GCGAAGACGA CTGGCGGGAG CAGATCCATA ATATACAGGT TACGCTGACG
GACAGTCTGA TAAGACAATC CGTCCGCCTG ATGCCGGACA CGATCTTCGC ACTCTCCGGA
GAAAAGATCA TCAGTGCTTT TATTGCCCGT CGTGATGCAC TGGAAAAGGA AGCGGTCAGC
TACTATAAAT TCCTGTCTAT ATATACAGAT GTACCGGCTT CCGATAAACA TGAGTTTTTT
GATATCCAGC GACAAGCAAA TGGGCATGTG CTGGTGACCA TCAACAAAAT GAAGAAAGAA
GGCACACTGG ATGGTGTTAT CTATAAACGT GATTTTGATC CGGCTGTCAC CAAAGAGGTC
AGGTTGTACG GGATGGATGG ACACGATATC TTTTCGGTAA GCGGACAGGA ATCTTCTCCT
ATCCGTATCC GTATGATTGG CGGGGATGGT GTGGATAGTT TTGCTGTCGC AGATAATGTG
CCCCGTAAAG GCCGGCTTTA TGTCTATGAC CGTTCTGACG AAGTGAATCA TCTTCCTCCG
AGAGGAGATG CAAAGATCCG TACCGGGAAG GATACAGTGG TAAATAGCTA CAACAGGCGC
AGCTTTCTGT TCGACCGCTT CGGACCCTTA CCCTCTATAC AATATAACCC TGACCAGGGC
TTTATGTTGC GCGTAAATAC CATGTATGAA AAGCAGGGAT TCCGGAAGGT ACCTTATGCG
CAACAACATC AGCTGATCGT CAGTTATGTT ACCGGCAGAC AGGCTTTCCT GTTGCAATAC
CTGGCGGACT ATAAACAACT GATCGGCAAA AATGACCTGC GGATCAATAT CCTGTCCCGC
GGTCCGCATA ACCTGAGCAA TTTCTTCGGA TTAGGGAATC AGTCTGTTTT TGTCAATGAT
GACGAAATGG ATATTACGTA CTATCGTAAC CGATATGACC TGGTAAATGG TGATGTGCGA
TTGTATCGTA CGATTGCTCC GCACCTGACC GTCAGTGCAG GTATCGCCGG ACAGTATTAC
ACCAGCAGAG AAGCAAATAA TAGCCGGAAA TTCCTGGGTG CGTACAACAG TGCAGTCCCG
GATGCACATG TATTTGACGA CAGACTGTAT GCCGGTCTGG TGACTGCTAT AGAAGCAGAT
ACCCGCAACG GCGTAATGAT GCCGCGCAGA GGCATCAACT GGCACGCAGA ATTAACAGGT
ATGCAGCAGA CGAACCGTGA GCATAAACGA TATGGTAAAC TGACGACAGA CTTTAGTTTC
TATGTACCCC TGATCGGAGA TTCTACACTG GTGATGGCGA ACCGTATTGC GGCAGGAACC
ACCTTCGGGG ATCCGGCGTA TTTTCAGATG ATGGCGCTTG GTGGTACACA GGTATTACGC
GGGTTTCATA CCAACCGTTT TATCGGTAAG ACGGCCGTGT ATCATAATTT TGAACTGCGG
CTGAAACTCT TTGATTTCAC ATCTTATCTG ATTCCTGGTA CCGTGGGACT GATTGGCTTC
AATGACCTGG GAAGGGTATG GATGCCGGGA GAGACGTCTC ACAGGTGGCA TGATGGTTAT
GGCGGCGGCT TGTATATCAT GCCGGTAGAT CTGTTTTTAA TACAGGCCGC AGTGGGCTTT
TCGGAAGAAG GAGCGCTGCC TTATATAACT GCCGGCTTCA GATTTTAA
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| Protein sequence | MSLYRLFTTL AVLAISTVQA QSPAGDSITV AISPAYDSVS GLHRTLFGES YRKLWAAPVK
MKVFYLEKEK GGLIIEQRGG GLQTKSLRLK DKEGHEWVLR TIQKYPERGL PPNLRATITK
DILQDQVVTA HPYSSLTVPP LAAALGIPHA NPQIVYIPDD PALGEYRKDF ANAVFLFEER
EPEDAERTDN TEKTQRKLEE DNDVHVYQQI VLRARLLDML LGDWDRHEDQ WRWERVKEDK
RVDYTPVPRD RDQVYYNTTG LFPWIISHQW LKSKFQGYHD HIRDIKGFNF NARYFDRYFL
NGLSEDDWRE QIHNIQVTLT DSLIRQSVRL MPDTIFALSG EKIISAFIAR RDALEKEAVS
YYKFLSIYTD VPASDKHEFF DIQRQANGHV LVTINKMKKE GTLDGVIYKR DFDPAVTKEV
RLYGMDGHDI FSVSGQESSP IRIRMIGGDG VDSFAVADNV PRKGRLYVYD RSDEVNHLPP
RGDAKIRTGK DTVVNSYNRR SFLFDRFGPL PSIQYNPDQG FMLRVNTMYE KQGFRKVPYA
QQHQLIVSYV TGRQAFLLQY LADYKQLIGK NDLRINILSR GPHNLSNFFG LGNQSVFVND
DEMDITYYRN RYDLVNGDVR LYRTIAPHLT VSAGIAGQYY TSREANNSRK FLGAYNSAVP
DAHVFDDRLY AGLVTAIEAD TRNGVMMPRR GINWHAELTG MQQTNREHKR YGKLTTDFSF
YVPLIGDSTL VMANRIAAGT TFGDPAYFQM MALGGTQVLR GFHTNRFIGK TAVYHNFELR
LKLFDFTSYL IPGTVGLIGF NDLGRVWMPG ETSHRWHDGY GGGLYIMPVD LFLIQAAVGF
SEEGALPYIT AGFRF
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