| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4677 |
|---|
| Symbol | |
|---|
| ID | 8360851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 5836472 |
|---|
| End bp | 5836978 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644966828 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_003124315 |
|---|
| Protein GI | 256423662 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0456] Acetyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.000068421 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGAAA TTGTAGCAGT AAAAAAAGAA GATGTTAAGA CGCTGGAACA GGTGAAGTCC
CTTTTCCGCG AGTACGCCAA CTGGTTGAGT GTAGATCTTA GTTTTCAGGG CTTCGAAGAA
GAACTGATCA GTTTACCTGA ACCCAATTAT GTAGCGCCCG CGGGAGCATT GTTTATTGCC
CTGGTTGACG GACATCCGGC GGGTTGCGTC GGCATAAGAC CGTTTGAAAA CGCTACCTGC
GAAATGAAAC GGCTCTTTGT ACGCGATGCT TTCAAAGGAC ATGGCGTAGG CAGAGCGCTG
GCCATCAAAG CTATTGAAGC CGGAAAGGAA CTGGGCTATA AACGTATGTT GCTGGATACG
CTGGCACATA TGCGCCCCGC TATTGAATTG TATACCAGCC TGGGTTTCCA GCCTATTGCT
GCGTACTACG ACAACCCTAT CAGCGACGCT GTATACCTTT CAATGATGTT AGAAAAGGAA
AGTGAAAATG CCGGTACGGC TATTTAA
|
|---|
| Protein sequence | MLEIVAVKKE DVKTLEQVKS LFREYANWLS VDLSFQGFEE ELISLPEPNY VAPAGALFIA
LVDGHPAGCV GIRPFENATC EMKRLFVRDA FKGHGVGRAL AIKAIEAGKE LGYKRMLLDT
LAHMRPAIEL YTSLGFQPIA AYYDNPISDA VYLSMMLEKE SENAGTAI
|
|---|
| |