Gene Cpin_4655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4655 
Symbol 
ID8360828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5810353 
End bp5810775 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content44% 
IMG OID644966806 
Productresponse regulator receiver protein 
Protein accessionYP_003124294 
Protein GI256423641 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00522257 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000000410945 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGAAGC ACGGACCTAT TCTTATCATT GAGGATGACA TTGATGACCA GGAGTTTTTA 
AGTAATGCTA TTGCTACTAC GGGCCTTCAC AATGAAATTG TCACATTCGC AGATGCTATC
GCTGCTATGA AATATCTGCT GGAGGTGGCT GCGCATCCGT TTTTGATTTT TTGTGATATT
AATTTGCCTA AGATGACTGG CCTGGAATTT AGGAGGCAAT TGCTTACCAA TGAAAAATTG
CGGGATCGGG GTACTCCGTT TGTATTTTTC TCAACGAGCG AACGGGCCGA CTTCATCAGG
GAGGCCAGTG CGCTGTCGGT ACAGGGCTAT TTTCTGAAGA GCCATAGTTT TGACGCTATT
GTCCGGGATG TACAGCTGAT TATTGACTAT TGGTCTTTGA GCAAACATCC GTTTTCTTTT
TGA
 
Protein sequence
MAKHGPILII EDDIDDQEFL SNAIATTGLH NEIVTFADAI AAMKYLLEVA AHPFLIFCDI 
NLPKMTGLEF RRQLLTNEKL RDRGTPFVFF STSERADFIR EASALSVQGY FLKSHSFDAI
VRDVQLIIDY WSLSKHPFSF