| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4636 |
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| Symbol | |
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| ID | 8360809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5785877 |
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| End bp | 5787658 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966790 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003124278 |
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| Protein GI | 256423625 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00173325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0770072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTA TTATATACAT CATGCTGCTC GCCGGATACG TACCTTTTTT TTCCTGCACA
AAGGATTTTC TGGACAATAC GGACAAGACA CAATTAACGG ATGAAATGCA ATGGTCGACA
GAAGGAGACG CCGATATCTT CCTCAATGAT ATTTATGGCA GTTTGCCAAA TTACTGGAAT
CAACCAGAGA ACCTGGATAA TTTCACCGAC GACAATGATG CCGGGTTCTA TTACACCTCT
TACAACTGGA AACAGGGAAT CGTATCTCCT GCCGGCACAG ATTATACGGT ATGGGGGGGC
ATTACCGGAT CAGGCGATCT TACCAATTGG CCCGCCACTT TCACCGCCGT CAGAAAATGC
AACACCTTTA TGGCGAAGGT CCAGGCATAT GCCGCCAACT TTTCGGATGC CTGGAGAGAA
AGACGTCTGG ACGAGGTCCG CTTCCTTCGG GCTTTCTTCT ATAGTGAACT CTGGATGCAC
CTCGGTGGAC TTCCCATTAT TACTAATGTA CCCGACCGTA ACACCGGTGA CAGCAGCCAG
CTGTATTATC CAAGGAGCAC GTTTGCCCAA ACGGTCGACT TTATTACCAA CGACCTCGAT
ACGGTCATTT TAAATGCACA TTTGGCTGTT AAGTATAACA GGGGTGATGC TGACGCAGGT
AGGGCGACGT TAGGGGCTGC ATTGGCTTTA AAAGGCTGGA TACAGTTATA CGCTGCCAGT
CCTGCCTTTA ATGCAGCACA ACCAGCTGCG GGCGCAGATC CTCATCATGT GGCCGGCTAC
GGGCAATTTG ACGGAAACAG ATGGGCCGCC GCCGCAGCCA CCTTCAGACA ATTCCTGGAT
CAATTTGGCA ACGGTCACCC TTATGGATTG TTTTCCGACT TGTCAGCTCT ATGGTATGAA
GCGAATGAGT ACAATAGCGA AATGATCTGG GACCGCCAGG TAGTAGCTGT CACTATGGGA
TCTTCCTTTG AACAATATGG CGGACCGGTA TGGATCAATG GCGCCTATTA TACCTGGGGC
AATTATAATC CTACGCAGGA ACTGATAGAT CAGTTTCAGA TGGCAAATGG CAAAAGTATA
CAGGATCCTG CATCTGGCTA TAACCCCCAG CGCCCTTATA TTGGCAGGGA ACCAAGGTTC
TATCAGTGGA TCGTCTATGA CGGTGCGCCT TACAAAATGG ATTGGATGGA CAAGCAGGAT
ACTATTTACA CACGTATAGA TAAAGTGCGG CCCTCCAAAA ATCAGATAGA TTTCGGTACG
GATGATGTCA GTAATACAGG ATATTACTTC AAGAAACGAT TGAATCCACT CGTGAGACCT
GGCGGAGGAA CCATCAGTGG TGCAAATTTC ATTTATTACC GCTATGCAGA AGTCCTGCTT
GGATACGCCG AAGCTCAGAA TGAAGCTGTA GGTCCGGATG CCTCCGTATA TAGTGCAATG
AACCAGTTAC GTGCCCGTGC AGGACTTCCG GATTTGCCAG CAGCACTCAA CCAGGATGGT
ATGCGTACTG CTATCCACCA GGAGCGGCGC GTGGAGTTGT GCTTTGAAAA CAAACGGTTT
TATGATCTCA TACGTTGGAA AACAGCGGAA CAATTGCTGA TCCATGACAG ACATGGTATG
AAGATTTCCA ACAGTATTCC CGCGAATAAC AGCGGCGTAT GGCAATATGA AGTTGTACCA
TTAAACCATC CGCATGTGTT CCTGCAAAAA ATGTATCTGA ATCCTATTCC GCAGGATGTC
ATAGACCGCA ATTCACGGAT CGTTCAGAAT CCAGGGTATT GA
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| Protein sequence | MKRIIYIMLL AGYVPFFSCT KDFLDNTDKT QLTDEMQWST EGDADIFLND IYGSLPNYWN
QPENLDNFTD DNDAGFYYTS YNWKQGIVSP AGTDYTVWGG ITGSGDLTNW PATFTAVRKC
NTFMAKVQAY AANFSDAWRE RRLDEVRFLR AFFYSELWMH LGGLPIITNV PDRNTGDSSQ
LYYPRSTFAQ TVDFITNDLD TVILNAHLAV KYNRGDADAG RATLGAALAL KGWIQLYAAS
PAFNAAQPAA GADPHHVAGY GQFDGNRWAA AAATFRQFLD QFGNGHPYGL FSDLSALWYE
ANEYNSEMIW DRQVVAVTMG SSFEQYGGPV WINGAYYTWG NYNPTQELID QFQMANGKSI
QDPASGYNPQ RPYIGREPRF YQWIVYDGAP YKMDWMDKQD TIYTRIDKVR PSKNQIDFGT
DDVSNTGYYF KKRLNPLVRP GGGTISGANF IYYRYAEVLL GYAEAQNEAV GPDASVYSAM
NQLRARAGLP DLPAALNQDG MRTAIHQERR VELCFENKRF YDLIRWKTAE QLLIHDRHGM
KISNSIPANN SGVWQYEVVP LNHPHVFLQK MYLNPIPQDV IDRNSRIVQN PGY
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