Gene Cpin_4624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4624 
Symbol 
ID8360797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5772006 
End bp5773922 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content44% 
IMG OID644966778 
Producthypothetical protein 
Protein accessionYP_003124266 
Protein GI256423613 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.706425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.495642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCAGA AAATCAGACT AGTAGCGTTA TTGATATGTA TCACCCAGTT TGTACACGCC 
GAAGGACTTG TTGATTCCCT TAATAAAGTG CTGGCACGTA AAGACATATC CCTGGAAAAT
CGCATCACCA CCATGGGATT CCTGGCAAGG GCTAAATGTG TAACAGATAT TGACGGGGCG
CTACGCCTTG AAAAAGAAGC CATGCAGCTC TGCAGGCAAT TGAACAAGCC AGCCACGACC
GCCTATATCT GGTCAATTAT GGTGTTGCTG GATTATTATC ATCACAGAGA TATACCTAAA
GCTTGTATAT CGGCGGACAG CGCCCTGTTC TATGCCCGTC AGTCACATGA TAAACTGGCG
CTGGGTATTG CCTGGTACCG CAAAGCATGG TCGCAAAACT TACAGGGGAA TTACAAAGAA
ACGGTAGATT TTGCCCTGGA AGGTCTGAAA AACCTGGAAG GCACCGATGG ATATACCTAT
GAAGCCAGCT TATATTATAT CATTGGCGGC GCCTATGCGG AATGGCGAGA CAAGCCCCAG
CAGGAAAAAT ATGCCCGCCT GTGCCTAGCT GCGGCCGAAA AATGCGGAGA TCCCGACAAC
CTCATTTCTG CTAATCAGGC GATGGGTACC TATTATCATT ACAGTTTCCA GAATAATGGT
ACGGACAGGC ATCTGCTCGA TTCTACTTTC TATTACTATC ACAGAGGCAT CGACGTTTAC
AAATCAGCGC CTGACAAAGT GGTTTTTAAA AGCAGCGTAG GGGTAATTGC CCTGAATGTC
GCCGGTTTGT ATATGCAATA CAAGATCGGA TCATATAAAG ATTCTGTTCT TCCCTACCTC
AACTTTGCTA TAAAAACGGC GCATGAGACC AAACAGGCAG CCGTATTGGG CACCTGTTAT
GGTATTATGA GCGATATTGA AATCGAAAAC GGGCATTATG CAAAAGCAGA GTCTTTATTA
TTACAGGGCT TATCTTCCCT GCTCATAGAC GGTATCGACC ATACCAGGAA CAGGTTACAG
TTGCTGGAAG GACTTATCAG CCTTTATGAA AAAACAGGGA ATTATCAGAA AGCCCTTCAA
TACTACAAAG ACTATCACAA AGTATATGAC GGCTTTTTTG ATGCCGAGAA ATTAAAGGCG
ACCAAAAACC TGGAAGAAAA GTATCAGTCT GAGAAAAAAG AACAGGCTAT AAAAACGCTG
AGTCAGCAAA ACGCTATGAA CCGTAAAATG AAATACCTCT ATGGCTTTAT CGGACTGCTG
ATGGTAGTGG CCGGGGTATA TATTTTCAGG TCGTATCACT TCCAGCTAAA AGCCAGCAAA
CAGCAAAAGC AGCTGTTGCA ACAGGAGAAG GAAGATGCCG ACCTGCTGGC CCGCCTCAAA
CAACAGGAGG TAAAGCAACT CGAACTGGAA AAACAGGAAG CCGCGCTGAC AGCAAGGGTG
AAAGAGGAAG AAACACGGCG TTTACTGGCC GAGCAAAAGC TGTTGCAGGA ACGTGAGGAC
AGACTACAAA AAGACCTGCT GGCAGTCAAT TTGCAGATAG AGCAGAAGGA TGAATTACTG
CAAACCATTC AAAAAAAGAT CGAAGAAAGC ACGGATAAGA GTTTTGTTGT CAACAAGATC
AATAACATTA TCGATCAGAA CAAAAAATCG GATGAAACCT TCGCCACCAA TAAAGCTGAT
TTCGACACCA TCCGTCCCGA GTTCTTCCAA CAGCTTAAAG AAAAATCCGG CGATACGTTA
TCGCGATTGG ATCTTAAACA TTGCATCTAT ATCTCCCTTG GTCTGACGAA TAAAGAAATC
GCCCAGCGTT TTGGCGTTGC TCCTAAAAGC ATTCTAATGG CCCGTTATCG CATTAAATTA
AAACTGGGTT TAGGTAAGGA TGACGATCTT GATGGCTTCA TCAGAACACT CAGTTAA
 
Protein sequence
MYQKIRLVAL LICITQFVHA EGLVDSLNKV LARKDISLEN RITTMGFLAR AKCVTDIDGA 
LRLEKEAMQL CRQLNKPATT AYIWSIMVLL DYYHHRDIPK ACISADSALF YARQSHDKLA
LGIAWYRKAW SQNLQGNYKE TVDFALEGLK NLEGTDGYTY EASLYYIIGG AYAEWRDKPQ
QEKYARLCLA AAEKCGDPDN LISANQAMGT YYHYSFQNNG TDRHLLDSTF YYYHRGIDVY
KSAPDKVVFK SSVGVIALNV AGLYMQYKIG SYKDSVLPYL NFAIKTAHET KQAAVLGTCY
GIMSDIEIEN GHYAKAESLL LQGLSSLLID GIDHTRNRLQ LLEGLISLYE KTGNYQKALQ
YYKDYHKVYD GFFDAEKLKA TKNLEEKYQS EKKEQAIKTL SQQNAMNRKM KYLYGFIGLL
MVVAGVYIFR SYHFQLKASK QQKQLLQQEK EDADLLARLK QQEVKQLELE KQEAALTARV
KEEETRRLLA EQKLLQERED RLQKDLLAVN LQIEQKDELL QTIQKKIEES TDKSFVVNKI
NNIIDQNKKS DETFATNKAD FDTIRPEFFQ QLKEKSGDTL SRLDLKHCIY ISLGLTNKEI
AQRFGVAPKS ILMARYRIKL KLGLGKDDDL DGFIRTLS