| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4622 |
|---|
| Symbol | |
|---|
| ID | 8360795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 5768948 |
|---|
| End bp | 5769946 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644966776 |
|---|
| Product | biotin synthase |
|---|
| Protein accession | YP_003124264 |
|---|
| Protein GI | 256423611 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0502] Biotin synthase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00433] biotin synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.151493 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAA CAACCGCATT ACGCCACGAC TGGACAAAAG AGGAGCTGCT GGCTATATAT
AATAAGCCAC TGCTGACGCT GATATACGAA GCTGCATCCG TACACAGGGA GTGGCACAAA
GCCGATGAGG TGCAGATATC GACGTTATTA TCGGTAAAAA CCGGCGGTTG TCCTGAGGAT
TGTTCGTATT GTGGTCAGGC TGCCCGGTAT CAGACCGGCA TCAAAGTACA GGCCTTGTTG
CCTACTGAAA CAGTGCTTGC GCACGCACGC AAAGCCAAAG AAAATGGCGC TTCCCGCTTC
TGTATGGCAG CTGCCTGGAG AGAAGTGCGC GATAACAGTG ATTTTGATCG CATTATTGAC
ATGGTAAAAG GTGTCAATGA CATGGATCTG GAGGTATGCT GTACCCTGGG CATGTTGACA
GAAAGCCAGG CAGAACGTTT AAAAGACGCT GGTTTATATG CTTATAATCA CAACCTGGAT
ACTTCCGAGG CTTATTATAA TGAGATTATC TCTACCCGAA AATTCGATAA CCGTATTAAA
ACGATCGATA ACGTTCGCAA AGCAGGTATC ACGGTTTGTT CCGGCGGTAT CATCGGCCTG
GGTGAGTCGC ATGAAGACCG TATCTCTATG CTGCTGACAC TGTCCGGTAT GGAAAAACAC
CCGGAATCAG TGCCTATTAA TGCCCTGGCA AGGGTGAAGG GTACGCCGCT TGAAAACAAC
CCTAAAGTAG ATATCTGGGA CATGGTACGT ATGATCGCTA CAGCGCGTAT CGCCATGCCA
GCTTCCATGG TACGCCTGAG TGCAGGCCGT ATCGAGATGA CTGAAGTAGA GCAGGCCTGG
TGTTTCATGG CAGGCGCTAA CTCCATCTTT ACGGGTGAAC GGGAAACCCT GTTAGTGACC
CCTAATCCGG GTGTATCTGA CGACTTACAG ATGTTACAGA ACCTGGGCTT AAAGCCACTG
GTAAAAGAAC CAGCTGTTGC AGAAGCAGTA AAAGCATAA
|
|---|
| Protein sequence | MSKTTALRHD WTKEELLAIY NKPLLTLIYE AASVHREWHK ADEVQISTLL SVKTGGCPED
CSYCGQAARY QTGIKVQALL PTETVLAHAR KAKENGASRF CMAAAWREVR DNSDFDRIID
MVKGVNDMDL EVCCTLGMLT ESQAERLKDA GLYAYNHNLD TSEAYYNEII STRKFDNRIK
TIDNVRKAGI TVCSGGIIGL GESHEDRISM LLTLSGMEKH PESVPINALA RVKGTPLENN
PKVDIWDMVR MIATARIAMP ASMVRLSAGR IEMTEVEQAW CFMAGANSIF TGERETLLVT
PNPGVSDDLQ MLQNLGLKPL VKEPAVAEAV KA
|
|---|
| |