| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4615 |
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| Symbol | |
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| ID | 8360788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5760100 |
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| End bp | 5760843 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644966769 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003124257 |
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| Protein GI | 256423604 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.991587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.149438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACAT TTGATGGTAA AGTAGTCGTT ATTACAGGCG GGAATAGCGG TATAGGGTAT
GCCACTGCCA GGGCGTTTAA AGAGCTGGGA GCATCCGTCA TTATAACAGG AAAACGGGAA
GATGCTTTGA AAAAGGCAGC AGCCGAATTG GACGTAACCG GTAAATTAAC GGATCAGGCT
AGTCTGGAGG ATATTGATAC GCTGGTCGCA GAGCTGCAGC ATACTTCGGG TAAAGTAGAC
GTACTGTTTA TTAATGCGGG CGTCGCTTTC TTTGCGCCGA TTGAATATAC TTCCGAGGAA
CAGTTTGATA CAATGATCGA CGTCAATTTT AAAGGGAGCT TCTTCACCCT GCAAAAGTTC
ATTCCTATAC TGAATGACGG TGCTGCTGTC ATCTTTTTAA CTTCCGGGAA TACAGCACTG
GTAATGGAGA ATAGCGCTGT TTATTCAGCG AGCAAATCTG CTGTCGGCCA TCTGGCCAGA
ATAGCAGCAA AGGAACTGGC TCCAAGAAAG ATAAGAGTGA ATACTGTGAA CCCTGGTCCT
ACAGAAACGG AGATGCAACA GAAATTTGGA TTTGATGAAG CGACCCTGGC AGCAATGAAA
GGACAGATAC TCACACAGGT ACCTTTAGCA AAGATGGGCA GACCGGAAGA TGTAGCCAGT
ATGGTTGTTT ATCTGGCTGA TAATACCATT TCTTCATTTA TCACAGGAGC GGAGTTTTTC
ATTGATGGCG GCATGGCTTT ATAA
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| Protein sequence | MGTFDGKVVV ITGGNSGIGY ATARAFKELG ASVIITGKRE DALKKAAAEL DVTGKLTDQA
SLEDIDTLVA ELQHTSGKVD VLFINAGVAF FAPIEYTSEE QFDTMIDVNF KGSFFTLQKF
IPILNDGAAV IFLTSGNTAL VMENSAVYSA SKSAVGHLAR IAAKELAPRK IRVNTVNPGP
TETEMQQKFG FDEATLAAMK GQILTQVPLA KMGRPEDVAS MVVYLADNTI SSFITGAEFF
IDGGMAL
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