| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4606 |
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| Symbol | |
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| ID | 8360779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5746276 |
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| End bp | 5748303 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966760 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003124248 |
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| Protein GI | 256423595 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1621] Beta-fructosidases (levanase/invertase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.337279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAGTG AACCGAACAA ACCCGATAAA AAAATGCAGT TTCGTTATTT CATGACGGCC
GTTGCCGTTC TGCTGCTCTG GACAGAAAAT CTATCCGCGC AGCACATTCC ACGTATGTAT
TTCACGGATA CATCCTCCGG GAAACCTATT GCCAAGGACC CTAAGATCGT ACATTTCAAA
GAAGCTTACT GGATGTACTA CTCCATACCC GGTAAAGCGG GTGCGGGCTG GCATATAGGT
ATCGCACGGA GTACAAACCT GAAGGACTGG CAAAAAACAG GCGAACTAAA CGCTACGGAA
GCATATGAGA AGAATGGCCT GTGTGCACCT GGTGCACTCG TACGTAATGA TACCATACAT
CTCTTTTATC AGACATACGG CAATGGCCCT AAAGATGCCA TCTGCCACGC TTATTCTACC
GATGGGATCC ATTTTCAGAA GAATGCAAGT AATCCCGTAT TCCATCCTTC CGGTGACTGG
AACAACGGTC GTGCGATAGA TGCTGAAGTC ACCTTCTATA AAGGACAATA TTTCCTTTAT
TTCGCTTCGC GTGATCCGAA AGGAGAAATA CAGTTGCAGG GTGTGGCAAC AGCCCCTGCC
GGTACAGATT TCTCCAGGGA ATCCTGGAAA CAGGCGAGCG ATGCTTCCAT ATTAAAACCC
GAACTACCAT GGGAAGGCAA ATGTATTGAA GCTGCTTCCG TGATGGAAAA AGACGGTGTA
TTGTACATGT TTTATGCAGG TAGCTATAAT AACGTTCCTC AGCAGATCGG TCTCGCACAG
AGTAATGATG GCGTTCACTG GACGCGTACT TCCTCCGTAC CCTTCCTCGC AAATGGGAAA
GCAGGTGAGT GGAATCATAG CGAGTCCGGC CACCCCGATA TTTTCAAAGC AAAGGATGGG
GAATACTATC TGTTTTTCCA AGGGAACAAT ACCGGTGACG GACAATCCTG GTACTTGTCC
AACCTGGAAC TGAACTGGGA TAAGACACTG CCTGTCATCG CTGCGCAGGA TGCTACTGTA
CAATCGTCTG AAGGAAAGGC GGTTCCTGAA GACTTCAAAC TTGAAAAGGG CAAAGACGTA
TGGCTGTTGA CTTATTTCCG GCAACGTTAT CCCACCCGCA TAGAAATTGA TGCAAAAGGA
AATACAATAG AAGTGCCATT ACCCAATCCC ATGTTACTGG AAAAAATGCA CATGGCATTG
TCCAATGATG GCCGTCACTG GACGCCTTTG AATGATAATA AGCCTGTATG GGACCAGCAC
GTACGTGATC CTTATGTTCG CCGCGGACCA GACGGTTTAT GGCGGATATT ATCCACAGGT
GGCGGGAGTA AGGACCGTGA GAAGGTAGGT CCCGGTTGTC TTTACCTTAC CTCACCGGAT
CTGATTCACT GGAAAGTAGA AGGTACATTG CCTTTGATGA AAGACGTACG TAACGACGCC
GGTGCTATAT CGGCCCGGAA TATCTGGGCG CCTGAGTGGT TTTATGATAA GAAGACCAAA
GAATATATCC TGATCTGGTC TTCTTCCTTT GAAGATGCCG GCTGGAAGAA CAGCCGCCTG
TGGTATTGTA CTACCCGCGA CTGGAAAACC TTCTCTCCGG CGAAAGTGTT TTTTGAACCG
CCTTATTCGG TCATAGACGG CACCTTGCTG GAACAGCAGG GTAAGTATTA CCTGTTTCAT
AAAGAAGAAG AATTTGGCGC TAAAACCGGT GAAAGAAGGG CTATCAGGGT AGCCGTCGCT
TCTAATGTAT ATGGTCCTTA TAAGATCATC GATGGCGCTT TAAATAATGG CCAGATCGTA
CCCGTTATTA CCGAAGGCCC TACGGCTATA AAAGAGCCAC AGAAAAAAGG ATGGTTACTG
TTATATGATT ACTGTATGAC AGATCGCTTT GGCGCTTCTT ATTCGCCGGA TCTCTATCAT
TGGACTGTCG AGGAAGATGT AAGGTTTCCG GATGCCGCAC GTCATGGTTG CGTATCACTT
ATCAAACCGG AAGAAGCGAA AGCCCTGATT GATGCATTCG GTATGTAA
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| Protein sequence | MFSEPNKPDK KMQFRYFMTA VAVLLLWTEN LSAQHIPRMY FTDTSSGKPI AKDPKIVHFK
EAYWMYYSIP GKAGAGWHIG IARSTNLKDW QKTGELNATE AYEKNGLCAP GALVRNDTIH
LFYQTYGNGP KDAICHAYST DGIHFQKNAS NPVFHPSGDW NNGRAIDAEV TFYKGQYFLY
FASRDPKGEI QLQGVATAPA GTDFSRESWK QASDASILKP ELPWEGKCIE AASVMEKDGV
LYMFYAGSYN NVPQQIGLAQ SNDGVHWTRT SSVPFLANGK AGEWNHSESG HPDIFKAKDG
EYYLFFQGNN TGDGQSWYLS NLELNWDKTL PVIAAQDATV QSSEGKAVPE DFKLEKGKDV
WLLTYFRQRY PTRIEIDAKG NTIEVPLPNP MLLEKMHMAL SNDGRHWTPL NDNKPVWDQH
VRDPYVRRGP DGLWRILSTG GGSKDREKVG PGCLYLTSPD LIHWKVEGTL PLMKDVRNDA
GAISARNIWA PEWFYDKKTK EYILIWSSSF EDAGWKNSRL WYCTTRDWKT FSPAKVFFEP
PYSVIDGTLL EQQGKYYLFH KEEEFGAKTG ERRAIRVAVA SNVYGPYKII DGALNNGQIV
PVITEGPTAI KEPQKKGWLL LYDYCMTDRF GASYSPDLYH WTVEEDVRFP DAARHGCVSL
IKPEEAKALI DAFGM
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