Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4602 |
Symbol | |
ID | 8360775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5743767 |
End bp | 5744093 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644966756 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003124244 |
Protein GI | 256423591 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.488901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGTAA AGAAAACCAG CCAGGACACA ATCAGGTCAG TAGGAGCATA CATCGCCGCG CATCCTGAAC GTCGTTTTAC CATCGTCGAA TTGAGCCTGC ATTTTCATAT CAGGACAACT GCATTAAAAG CTGCATTTAA GGCTGAATTT GGCGTAACGA TTCACCAGTA TCACCTGCAG GTGAGTATGC AAAAAGCCCG GCAGCATTTA GAAGCTGGTC AGCAGGTAAA AGAAACGGCC CTTCAGTTCG GATACCGGCA TATCGGCAAT TTCTCCCGTG CATTTAAAAA GGTACATAAT ACGCCGCCGG AAGCACATAA ACAGTGA
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Protein sequence | MPVKKTSQDT IRSVGAYIAA HPERRFTIVE LSLHFHIRTT ALKAAFKAEF GVTIHQYHLQ VSMQKARQHL EAGQQVKETA LQFGYRHIGN FSRAFKKVHN TPPEAHKQ
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