Gene Cpin_4602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4602 
Symbol 
ID8360775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5743767 
End bp5744093 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content47% 
IMG OID644966756 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003124244 
Protein GI256423591 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.488901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTAA AGAAAACCAG CCAGGACACA ATCAGGTCAG TAGGAGCATA CATCGCCGCG 
CATCCTGAAC GTCGTTTTAC CATCGTCGAA TTGAGCCTGC ATTTTCATAT CAGGACAACT
GCATTAAAAG CTGCATTTAA GGCTGAATTT GGCGTAACGA TTCACCAGTA TCACCTGCAG
GTGAGTATGC AAAAAGCCCG GCAGCATTTA GAAGCTGGTC AGCAGGTAAA AGAAACGGCC
CTTCAGTTCG GATACCGGCA TATCGGCAAT TTCTCCCGTG CATTTAAAAA GGTACATAAT
ACGCCGCCGG AAGCACATAA ACAGTGA
 
Protein sequence
MPVKKTSQDT IRSVGAYIAA HPERRFTIVE LSLHFHIRTT ALKAAFKAEF GVTIHQYHLQ 
VSMQKARQHL EAGQQVKETA LQFGYRHIGN FSRAFKKVHN TPPEAHKQ