| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4585 |
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| Symbol | |
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| ID | 8360758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5730155 |
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| End bp | 5731030 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644966740 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003124228 |
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| Protein GI | 256423575 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0477904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACACAA AAGTATTGAA GATTCCGTTT GGATTGATCT CTGCCCCGCA TTATCATAAC
GCATTGAAAC TGGATGGATT GTCTATTGTA GAGTCCTGCT CGCATACCAA TTCAACCAGC
AAGAAAGGGA GTCAGTACCT GGAAGAAGCG ATGCTGCTGG TGGTATTGGA AGGGACAAAC
GTGATCACGC ACGGGAAGAT GGAATATGTG ATCAGGAAGA ATGAGATGAT CCTGATGAAG
AAGGCTTCAC AGATCAACTA CGACAAGATC GGTAATCCCG AAATGGGCTA TCTGTATGAA
AGTATGATGT TCTTCCTGAA GGAGGAATTC ATTATCGATT TTATAAAAAT GGCCAGGATA
GAATCTGTGG AAACAGCAGA AGCAGCCAGG ATCTGTCCGA AGCCTGTGAA CGACCGCCTA
TTGAAATTCT TTGAGTCAGT AAAGCCTTAC TTTCATGACC AGGAACAGAT CGATGGTGGA
CTGATCAGAC TGAAAATGCT GGAGCTGCTA TATGACCTGA CGAGTACAGA CAGGAATCTG
TTACAGCAGT TATTACAGCT GAAACAACAG GTTTATGCAG ATATACCCAC TGTTGTAGAG
GAAAATTATG CTAATCCCAT ATCGCTGAAT GATCTGGCTT ATCTGTGCGG CAGAAGCCTG
AGTAGTTTTA AGCGCGATTT CCATGCTATT TATCATACGA CGCCTGCTGC CTGGATCCGT
CAGAAACGCC TGACAAAAGC AAGGGAAATG CTGGCAACGG GTATGAGCGT AAAGAATGTG
TGTTATTCCC TTGGATTTGA AAGCAGCGCA CACTTTTCAC GTTTATTTAA GGCACACTTT
GGTCAGTCAC CTTCTGCGAG CAAGCAACTG ATATAG
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| Protein sequence | MNTKVLKIPF GLISAPHYHN ALKLDGLSIV ESCSHTNSTS KKGSQYLEEA MLLVVLEGTN
VITHGKMEYV IRKNEMILMK KASQINYDKI GNPEMGYLYE SMMFFLKEEF IIDFIKMARI
ESVETAEAAR ICPKPVNDRL LKFFESVKPY FHDQEQIDGG LIRLKMLELL YDLTSTDRNL
LQQLLQLKQQ VYADIPTVVE ENYANPISLN DLAYLCGRSL SSFKRDFHAI YHTTPAAWIR
QKRLTKAREM LATGMSVKNV CYSLGFESSA HFSRLFKAHF GQSPSASKQL I
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