| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4578 |
|---|
| Symbol | |
|---|
| ID | 8360751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 5720969 |
|---|
| End bp | 5721487 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644966733 |
|---|
| Product | YceI family protein |
|---|
| Protein accession | YP_003124221 |
|---|
| Protein GI | 256423568 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2353] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.234901 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATC AAACATTTCA CATTATCAAT GCGCAAAGCA ATATTGATTG GGTTGGTAAA
AAAGTAACCG GCGCTCATAA TGGTACAATT GCCATCAAAG AAGGCCAGCT AAGCGTCAGT
GGTAACCAGC TGACCGGCGG TACCTTTGTA GTAGACACTA CCTCTATCAA AATACTGGAT
ATCGCTGATC TGGCCACTAA TGCGCAGTTC CTGGGCCACC TTGTTTCTGA CGATTTCTTC
TCTACACAAC AGTATCCGGA AGCTACGCTG GTCATCAGAT CCGTGTCAGG TACACATATC
AACGGAGACC TTACGATCAA AGGTATCACA CATCCTGTGA GCTTTGATGC AGCTATAACC
GTCAATGGTA CGCAGCTGAG CGCCAGCGGT AAGATCATCA TCGACCGTAC TAAATATGAC
ATGCGCTTCC GCTCGGGCAA TTTCTTCAAA GATCTGGGCG ATACCCTGAT CTACAACGAC
TTCGAATTAT CTATCACCTT AACCGCTAAA GCTGCCTAA
|
|---|
| Protein sequence | MENQTFHIIN AQSNIDWVGK KVTGAHNGTI AIKEGQLSVS GNQLTGGTFV VDTTSIKILD
IADLATNAQF LGHLVSDDFF STQQYPEATL VIRSVSGTHI NGDLTIKGIT HPVSFDAAIT
VNGTQLSASG KIIIDRTKYD MRFRSGNFFK DLGDTLIYND FELSITLTAK AA
|
|---|
| |