| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4556 |
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| Symbol | |
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| ID | 8360729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5693602 |
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| End bp | 5695434 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966711 |
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| Product | Beta-galactosidase |
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| Protein accession | YP_003124199 |
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| Protein GI | 256423546 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1874] Beta-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.108678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0283315 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CTGGCTTTAT TACATTACTC ATTGTTTTTT CCTACTTGTT TTCCATCGCA
CAGCAACAGC ATACTTTTAC CCTTGGTGAT ACAGCTTTTC TGCTGGATGG AAAACCTTTG
CAGATGATTT CCGGGGAAAT TCACTATCCC CGTGTACCCA GAGAATGCTG GCGGGACCGG
ATGAAGATGG CCAAAGCGAT GGGGTTAAAT ACAATAGGCA CCTACGTATT CTGGAATGTA
CACGAACCTG AAAAAGGGCA ATATGATTTC TCGGGGAATA ATGATATCGC GGCTTTTGTA
AAAATGGCGA AAGAGGAAGA TTTATGGGTT GTACTAAGAC CCAGCCCTTA CGTTTGCGCA
GAATGGGAAT TCGGAGGCTA TCCTTACTGG CTGCAGGAGA TAAAAGGGCT GAAAGTACGC
AGTAAAGAGC CGCAATATCT TGAAGCCTAC AGGAACTATA TTATGGCGGT GGGTAAACAG
TTATCTCCAT TACTGGTCAC CCACGGCGGC AATATCCTGA TGGTGCAGAT AGAAAATGAA
TACGGGTCTT ATTCCGATGA TAAAGATTAT CTCGATATTA ACCGGAAAAT GTTTGTCGAA
GCAGGCTTCG ACGGACTGCT ATATACCTGT GACCCGAAGG CGGCTATCAA AAATGGCCAT
TTACCCGGCT TATTACCCGC TATTAATGGG GTCGATGATC CCTTACAGGT AAAACAACTG
ATCAATGAAA ATCATAGCGG AAAAGGGCCT TATTATATTG CTGAATGGTA TCCCGCCTGG
TTCGACTGGT GGGGCACAAA ACATCATACC GTTCCATACC GGCAATACCT GGGTAAACTG
GATAGCGTAC TGGCCGCAGG AATTTCTATT AATATGTACA TGTTCCATGG CGGTACGACG
CGTGGTTTTA TGAACGGCGC CAATGCCAAT GACGCCGATC CATATGAACC ACAGATCAGC
AGTTATGACT ATGATGCACC GCTCGACGAA GCAGGTAACG CAACAGAGAA GTTTATGCAG
TTCCGTAATG TAATCGCTAA ACACCTGCCT GCGGGAACTT CCTTACCGGA GGTGCCTGCG
AAAAGACCTG TTATCAGTAT TCCCGAGATC CACCTTCCTG CGGCAACCCG TATTTTTGAT
CTGTTGCCAA AACCTGTTGG CAGTGCCAAG CCGCGTACAT TTGAAGACCT GGGTCAGGCA
TATGGCTGGG TGATGTATAG TACCACGCTG ACGGGAGGTA GGAAAGGGCT TTTACAGTTA
AAGGAATTAC GCGATTATTG TGTGGTAATG GTGAATGGAA AAAGAGCAGG TGTACTGGAC
AGAAGATCAA AGAGGGATAG TATCGCGCTG GATTTACCCG CCGGAAAAGT GAAACTGGAC
CTGCTGGTAG AGAACCTGGG ACGTATTAAT TTCGGCCCAT ATCTTTTATC CAACCGGAAA
GGCATCACCG AAAAAGTACT TTTTGACAGG CAGGAGCTGA AAGGCTGGCA GCAATATGGT
TTACCATTCG ATAAGCTGCC TGCTGTAGCC GCGAAAGGGA TCAAGGCAGG GGCAAATGTA
CCTACCTACA GACAGGGTAC TTTTACCTTG GATAAAACCG GTGATACCTG GCTGGATATG
AGTAACTGGG GTAAGGGCGC TGTATGGATC AATGGTCATC ACCTGGGAAG GTACTGGCAG
GTTGGTCCGC AACAGACGAT CTATGTACCT GCCGAGTGGC TGAAGAAAGG AATGAACGAT
ATTGTCATTA TGGAATTAAT AAAGCCGGAA ATGGAGATGC TGTCGGGTAT CGATCATCCG
ATACTGGATG TATTACATCC TGAGGCGCTG TAA
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| Protein sequence | MKKTGFITLL IVFSYLFSIA QQQHTFTLGD TAFLLDGKPL QMISGEIHYP RVPRECWRDR
MKMAKAMGLN TIGTYVFWNV HEPEKGQYDF SGNNDIAAFV KMAKEEDLWV VLRPSPYVCA
EWEFGGYPYW LQEIKGLKVR SKEPQYLEAY RNYIMAVGKQ LSPLLVTHGG NILMVQIENE
YGSYSDDKDY LDINRKMFVE AGFDGLLYTC DPKAAIKNGH LPGLLPAING VDDPLQVKQL
INENHSGKGP YYIAEWYPAW FDWWGTKHHT VPYRQYLGKL DSVLAAGISI NMYMFHGGTT
RGFMNGANAN DADPYEPQIS SYDYDAPLDE AGNATEKFMQ FRNVIAKHLP AGTSLPEVPA
KRPVISIPEI HLPAATRIFD LLPKPVGSAK PRTFEDLGQA YGWVMYSTTL TGGRKGLLQL
KELRDYCVVM VNGKRAGVLD RRSKRDSIAL DLPAGKVKLD LLVENLGRIN FGPYLLSNRK
GITEKVLFDR QELKGWQQYG LPFDKLPAVA AKGIKAGANV PTYRQGTFTL DKTGDTWLDM
SNWGKGAVWI NGHHLGRYWQ VGPQQTIYVP AEWLKKGMND IVIMELIKPE MEMLSGIDHP
ILDVLHPEAL
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