| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4552 |
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| Symbol | |
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| ID | 8360725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5687640 |
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| End bp | 5689856 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966707 |
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| Product | histidine kinase |
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| Protein accession | YP_003124195 |
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| Protein GI | 256423542 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00113459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0314449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTCGTA TATATATCAT CCTGACGTTA TGCCATATCT TTTTCTTTGG TAATACCTAC
GCACAGCGGG GTGCTGATAC ATTGGAAGCA GCCCTGAAAC GTCCCGGACT GGAAAAAGGC
GAACGTATTT TCCTGATGAC AAAATATGGT TCTGTCCTGT TCTTCAGAGA CGAGAAAGCT
GCGGCTTTCC GCGTTTTCCA GGAACAGTTG TTACAGGCGC GTAATATGCC GGATGGCAGA
TATGCAGCCT ATACATACGG TATCCGTGCC ATGAGTCGTC GTATCGATGA CCAGATCAAT
GCCGCTCACA AAGACCTGGA CAGCGCCACC ATGTACATCG CACATACCAA GGATATGCGT
ATGAAAGGCT ACATAGAATA TTGCAGGGGA TGGATGCAGA ACCGCGATAA CCAGGCAGGA
GAAGCCGTGA AGAGCTTTAT CAGCGGACTC AGATTACTGG AAGCAGCAGA AACAGACGAT
TATAAAGGGG CGATCTATAA CGAACTGTAT AGCATCTACG CAGAATGGAA TGACTATAAG
ACACAGGAGA AATACGCGCG TCTGAACCTT GTACTGGCAG CAAAGACCCG TAATCCCAAT
ACGATCTTCA ACGCTTACCG GATGATGGGA ACCACCTTTG AATCCCTGTA CCGGCTGGAT
ACGACTTCCA CAAGACCACT GGACTCCGCT TATCACTATT ATACCCGCGC CCTGCATGTC
TATGAGAAGA ACAGGCCCAA TATGGAGTCC GCTTCTGATT ATGCCTTCAT TGCCATGAAT
CTGGCGAATA TATTCACACA GTTTATCGAT TATCAGCAGC GGGATAGCGC ACTGCTTTAT
ACCCGGAAGG GGCTGGAAGA TGCGTTGAAG AGCAAGCAAT ACACCTTTGC GGCAGATGCG
TATACGATCC TGTCTCAATT CGCAGAAGAG GATCAGGACT ATAAAAGTGC ACAGCAGCTG
ATGGTACAGG CGCTCTCTTA CATCCAGCAG GAAACCCTGT ATGATAACCG GACACTTTTC
ACCATCTTCA GGAGATTATC CGGTCTGGCA GAACGGGATA ACAACTATGT GGACGCCCTG
CACTATTACC GGGAATACCT GAAAGTCTAC CAGGATGTCT ACGACGCAGA GAAGATGTCT
ACCGGTAAAC GCCTGGAAGC CCAGTACGAA GCCGAGAAGA AAGAAAAACT ACTGGCCTTT
ATGCAGCTGG ATGCCGCGCG GAAGGCGGGA GAAATAGACA GACTGCATTT CCAGGATGAA
CAAAGAGCGC AGCAACTGGC TTTTATGGAA TTGCAGGGCG AAAAGAACCG CCAGCAGTTA
TCACTGGCAC AACTACGCGC CCAACAGAAA GAACAGGAAT TGTCTATCGC GCATATGAGA
GCCCGGCAAC GTGACCAGGA ACTCAAATCC ATTCAGCAGA AAATGTTGTA CAACCGTCGT
CTTAATACCG TATATACATT GCTGATTCTA GCCAGTCTGG CCGCTCTCGG CCTGATGATA
TACGCCTACC GGGAACGCTC TAAAAGTATG CGTCAGCAGA GCAGGATGCA TCACCTGGAA
ATACAACGGA TCAATAAGGA TAATGAGATT ACTACTTTAT CCGCTATGTT GGACGGACAG
GAGAATGAAC GCGCCAGACT GGCGAGGGAT TTACATGATG GTCTCGGCGG ACTCCTATCC
GGTACTAAAA TAGAGTTGTC CGGTATGTTG CCGATGCTGG GACAGGACAG CCAGAAAAGT
CTGCTCAGAA AGACCCTGGG AAGGATCGAT TCCGCCGTGT CGGAACTCCG CCTGGTAGCA
CATAACCTTA CACCGGAACT GCTGGCCAGA CAGGGATTGG CAGCTGCACT ATGTAATTAC
TGCGAAAACC TGAGTAACGA CAAACTGGAG ATCACTGCCC AGATTGTAGG CGTACACGCT
AAAATGGACC ATGTAAAGGA GATTGTGGTT TACCGTATCG TACAGGAACT GGTTAATAAC
GTCATCAAAC ACGCTGCTGC TTCTACTATG CTGGTGCAAT TGCAGCAGAA CGGTCAGCAG
CTGTTCCTGA CGGTGGAAGA CGATGGAAAA GGATTTGATA TCACGAAGGC GGGAAACTCA
CGTTCCGCCG GATTGCTCAA TATACGCTCC CGCGTAGCTT ACCTGAAGGG AGACATTCAG
TTTCATGCTG CACCGGGTGA GGGAACGGCT GTAGAGATCA ATTTTCCGAT TAATTAA
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| Protein sequence | MIRIYIILTL CHIFFFGNTY AQRGADTLEA ALKRPGLEKG ERIFLMTKYG SVLFFRDEKA
AAFRVFQEQL LQARNMPDGR YAAYTYGIRA MSRRIDDQIN AAHKDLDSAT MYIAHTKDMR
MKGYIEYCRG WMQNRDNQAG EAVKSFISGL RLLEAAETDD YKGAIYNELY SIYAEWNDYK
TQEKYARLNL VLAAKTRNPN TIFNAYRMMG TTFESLYRLD TTSTRPLDSA YHYYTRALHV
YEKNRPNMES ASDYAFIAMN LANIFTQFID YQQRDSALLY TRKGLEDALK SKQYTFAADA
YTILSQFAEE DQDYKSAQQL MVQALSYIQQ ETLYDNRTLF TIFRRLSGLA ERDNNYVDAL
HYYREYLKVY QDVYDAEKMS TGKRLEAQYE AEKKEKLLAF MQLDAARKAG EIDRLHFQDE
QRAQQLAFME LQGEKNRQQL SLAQLRAQQK EQELSIAHMR ARQRDQELKS IQQKMLYNRR
LNTVYTLLIL ASLAALGLMI YAYRERSKSM RQQSRMHHLE IQRINKDNEI TTLSAMLDGQ
ENERARLARD LHDGLGGLLS GTKIELSGML PMLGQDSQKS LLRKTLGRID SAVSELRLVA
HNLTPELLAR QGLAAALCNY CENLSNDKLE ITAQIVGVHA KMDHVKEIVV YRIVQELVNN
VIKHAAASTM LVQLQQNGQQ LFLTVEDDGK GFDITKAGNS RSAGLLNIRS RVAYLKGDIQ
FHAAPGEGTA VEINFPIN
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