| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4534 |
|---|
| Symbol | |
|---|
| ID | 8360707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 5656162 |
|---|
| End bp | 5657202 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644966689 |
|---|
| Product | aldo/keto reductase |
|---|
| Protein accession | YP_003124177 |
|---|
| Protein GI | 256423524 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.00676979 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACTATA AGATCTTCGG AAAGAAGTCA GGCCTGCGTG TGTCTGAGCT TGTACTAGGA
ACTGGTAATT TCGGTACGCG CTGGGGACAT GGCGCTACCC CGGAAGAATC GAAGAAGGTA
TTCGACGCGT ATGTTGCCGC TGGGGGCAAC TTTATTGATA CAGCTGACGG GTACCAGGTA
GGAGAATCTG AAGAGCTCCT GTCGGGTTTT ATTGCTGATA AAAGAAATGA CCTGGTACTA
GCTTCTAAAT TTAGCACCGG CGGTTCTACA TTGCTGACTA CAGGTAATAG CCGCAAGAAC
ATCGTCCGTT CTGTTGAAGC AAGTCTTAAG CGTCTTAATA CGGATAGACT GGACTTGTAC
TGGGCGCATA TTGATGACAG GCAGACACCT GTAGAGGAAA TTGTCCGCGG TTTAGATGAT
CTTGTACAAA GCGGAAAGAT CGTTTATGCA GGCTTTTCAA ACTATCCTGC CTGGAAAACC
GCCAATGCCT CCCTCATGGC CGATCTGCGC GGCTGGGCGC CGATTGTAGG TATTCAGATA
GAATACAACC TGATTGAACG TACGCCTGAT AGGGAATTGC TGCCGATGGC AGAAGCATTA
GGCCTTGGAG TCGCCTTCTG GTCACCGCTC GCCGGAGGTA CACTCACCGG AAAATATCGT
ACACCTGCAA CAAACAAAGA CTCCCGGCTG GAAAAATGGG GCGACTTTCT TGTTAAAGGC
GAAAAAACCA ACCGAGAGAC GCTTATACTG GATACGCTTA CCGATATTGC CGGCACGCAT
CAGGCAAAAT TGCTCCATGT GGCATTGGCA TGGTTACGTC AGATTTATAA ACCTAACGAA
TTGTCAACAG TAACCATTAT CGGTCCTCGT AACCAGGAGC AATTACAGGA TAACCTCGAC
TCATTACAGG TAACGCTCAG TGAAGACGAG ATCAAAAGAC TCAGCGACGT GAGTGCCATC
TCATTGGGAT CACCGCATGA AATTATTACA GCTTCCCAGC AGCTCATCTT TGGCGCGGGG
TCAGGACATA CACAATCCTG A
|
|---|
| Protein sequence | MNYKIFGKKS GLRVSELVLG TGNFGTRWGH GATPEESKKV FDAYVAAGGN FIDTADGYQV
GESEELLSGF IADKRNDLVL ASKFSTGGST LLTTGNSRKN IVRSVEASLK RLNTDRLDLY
WAHIDDRQTP VEEIVRGLDD LVQSGKIVYA GFSNYPAWKT ANASLMADLR GWAPIVGIQI
EYNLIERTPD RELLPMAEAL GLGVAFWSPL AGGTLTGKYR TPATNKDSRL EKWGDFLVKG
EKTNRETLIL DTLTDIAGTH QAKLLHVALA WLRQIYKPNE LSTVTIIGPR NQEQLQDNLD
SLQVTLSEDE IKRLSDVSAI SLGSPHEIIT ASQQLIFGAG SGHTQS
|
|---|
| |