Gene Cpin_4520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4520 
Symbol 
ID8360693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5635887 
End bp5636258 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content47% 
IMG OID644966675 
Producthypothetical protein 
Protein accessionYP_003124163 
Protein GI256423510 
COG category[R] General function prediction only 
COG ID[COG3631] Ketosteroid isomerase-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.38212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.255709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAA ACAAGCAAAC CGTGACCCGT TATATGGAAG GGTTCAGGAA AAAAGATCAT 
GAGATGGTCA TGTCCTGTCT GACAGATGAT GTGCTCTGGG AGATGCCGGG ATTTTACCAG
CTGGCAGGTA AAGGTGCTTT TGACAGGGAG ATGGAGGATG ATGCTTTTGA ACCGGATCCG
GAGATCTTCG TAACAAGACT GATTGAGGAG GACAATATTG TGGTAGCGGA AGGGAAGGTA
CTGTCAAAAA GAAAAGACGG CAGCACGCTG GAGGCAGCCT TTTGTGATGT GTTTCATATG
GAGGACGGGA AGATCAGACA GCTGACCAAT TACCTGATGG AGAAGAAACA GGAACTGGCT
GCTGATCATT AA
 
Protein sequence
MTTNKQTVTR YMEGFRKKDH EMVMSCLTDD VLWEMPGFYQ LAGKGAFDRE MEDDAFEPDP 
EIFVTRLIEE DNIVVAEGKV LSKRKDGSTL EAAFCDVFHM EDGKIRQLTN YLMEKKQELA
ADH