Gene Cpin_4481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4481 
Symbol 
ID8360654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5572861 
End bp5573805 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content50% 
IMG OID644966636 
ProductMagnesium chelatase 
Protein accessionYP_003124124 
Protein GI256423471 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1239] Mg-chelatase subunit ChlI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.925614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.139276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCAT TTCCTTTTAC AGCCATATAC GCACAGGACG ACTTCAAACT GGCCCTCATA 
CTCTGTATGA TAGAACCGGG CCTTGGAGGT GTACTGGCAC TGGGCGACAA AGGCACCGGT
AAAACGACGA CCGTCAGGGG ACTCAGTCAC CTGATGCAGC ATAGTCTGCC CGACTTCCCT
TTTGTAAACC TGCCCATAGG CGCTACAGAA GACAGGGTGC TGGGCACCGT TCAACTGGAT
ACCCTGATCA ATGACAGGAA GATCGCTATT CAGGCGGGAC TACTGGCTAC CGCTAATCAT
GGTATATTGT ATATCGACGA GGTCAATCTC CTGAATGATT ACCTCATGGA CATTCTGCTG
GATGCTTCCG CCAGTGGTGG TTACCACCTG GAAAGAGATG CGGTGTCTCA CTGGTTTGAA
AGTAAGTTCT GCCTGGTAGG TACGATGAAT CCGGAGGAAG GCGAACTGCG TCCGCAACTG
CTGGACCGCT TCGGACTAAG TGTCACTGTT CATACACCCA TGGACCGGAC CGACCGTATG
CAGATCGTGA GCCGTCGTTT ACAGTTTGAT GCCGACATTC CTGCTTTCCT CGCTCAATAT
GAGGCGGCTG AACAAGAACT TGCAGAAAGG ATCGCTACTG CCAGGGAGCA GGTAAAACAA
GTCACATACG ACGAAATGAT ACAGGCAACC ATCGCAGATG CCTGTATCGC ACATAAAGTG
GAAGGCTTAC GGGCCGATAT TCTGTTGCTG AAAGCAGCAA GAGCATATGC GGCTTTCCAT
CACCGGAAAT CCGTCACCAC AGACGACGTA CATAAAGTGA TGCCTTTTGT ACTCTCCCAT
CGTTCAAAAA ACTATTCTTC ATCACAAAAT CCTCAGCAGC AAAGAGAGCA GCAGTCTCCC
AGGGATGAAA AGGAGGGCGA TTCGATAAGG ATAAAAATGA ACTGA
 
Protein sequence
MQSFPFTAIY AQDDFKLALI LCMIEPGLGG VLALGDKGTG KTTTVRGLSH LMQHSLPDFP 
FVNLPIGATE DRVLGTVQLD TLINDRKIAI QAGLLATANH GILYIDEVNL LNDYLMDILL
DASASGGYHL ERDAVSHWFE SKFCLVGTMN PEEGELRPQL LDRFGLSVTV HTPMDRTDRM
QIVSRRLQFD ADIPAFLAQY EAAEQELAER IATAREQVKQ VTYDEMIQAT IADACIAHKV
EGLRADILLL KAARAYAAFH HRKSVTTDDV HKVMPFVLSH RSKNYSSSQN PQQQREQQSP
RDEKEGDSIR IKMN