Gene Cpin_4478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4478 
Symbol 
ID8360651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5570315 
End bp5571073 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content49% 
IMG OID644966633 
ProductPrecorrin-6x reductase CbiJ/CobK 
Protein accessionYP_003124121 
Protein GI256423468 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2099] Precorrin-6x reductase 
TIGRFAM ID[TIGR00715] precorrin-6x reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0112617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.137463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTAG TTTTTGGTGG AACGACGGAA GGTAAGAAAG TAGCGGGCAT ACTAGAGGAA 
TATGCGCGCC CCTATTACTA TTCTACCAAA ACAGAGATAG ATTTTTCAAC TGGTCAGTAT
GGGCAATACC GGCATGGCGC CATGACAGCG GAAGATCTAC AAGCCTTCTG TATTGCCCAG
GACGTAAAAG CCATTGTACA TGCCAGTCAC CCGTTTGCCA GCGTACTCCA CGAAACGATC
CACACAAGTG CACAGGCATT GTCGCTACCG GTATTTCGTT TTGAACGCAG TTATCCTGAA
AAGCAGGAAC ATCCGCTGAT CCGGTATGTG GATACTTATA AAGCGGCGAC CGGCTGGCTG
GAACAGCATC CGGTAAAAAA GCTGCTGGCA CTGACCGGTG TACAAACGAT CGCTCCGTTG
CAGTATTACT GGCAGCAACA TGCGACCATC TTCCGGATAT TACCCAGAGA AAGTTCGCTG
GCATTGGCAA AAGCCGCCGG TTTTCCGGAG GAAGATCTTA TCCTGGAGAT GCCGGGAGAT
GATCTGCAAC AGGCATCTGC CTTAATAAAA CAATACCAGA TCGGGGCTAT CCTGACGAAA
GAAAGCGGAG AATCCGGGTT TCTTTCTACC AAGATCAAGG CGGCCCTGGA AAACAATATA
CCGATACTGA TCGTCCGGCG CCCTGTTCTA CCGGAGGCAT TTATTCCTGT AACGGATGCG
GCATCATTAA TAGGACACTT AAATCGTTTA GGGCTATGA
 
Protein sequence
MILVFGGTTE GKKVAGILEE YARPYYYSTK TEIDFSTGQY GQYRHGAMTA EDLQAFCIAQ 
DVKAIVHASH PFASVLHETI HTSAQALSLP VFRFERSYPE KQEHPLIRYV DTYKAATGWL
EQHPVKKLLA LTGVQTIAPL QYYWQQHATI FRILPRESSL ALAKAAGFPE EDLILEMPGD
DLQQASALIK QYQIGAILTK ESGESGFLST KIKAALENNI PILIVRRPVL PEAFIPVTDA
ASLIGHLNRL GL