| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4460 |
|---|
| Symbol | |
|---|
| ID | 8360633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 5551872 |
|---|
| End bp | 5552909 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644966615 |
|---|
| Product | Cytochrome-c peroxidase |
|---|
| Protein accession | YP_003124103 |
|---|
| Protein GI | 256423450 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1858] Cytochrome c peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0825354 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCGAT TACAATTAAT ACTGATCACG GGATTTTCAC TTTTACTACT CGCCTGTAGT
AAAAGTGATG ATATCCTGGC TTTCATCGGA TTTAAAAAGC CGGCGCATTT TCCTGCGCCT
GTATACAAGC TGGAAAACAA TCCGGTTACG CAGGAAGGTT TTGAATTGGG CAGGAAGCTC
TTTTATGAGT CACGGCTTTC CCGGAACAAT ACAGTTTCCT GTGGGTTCTG TCATTTGCAG
ACAGCGGCAT TTACCCATCA TGGACATGAT GTGAGTCATG GGATAGACGA CCGCTTAGGT
AGCCGTAACT CCCCTCCCAT TATGAATCTC GCCTGGAACA CGACGTTTAT GTGGGATGGC
GGTGTATTTG ATCTTGACCT GCAACCTATC GTACCGATTA CAAATCCGGT AGAAATGGAT
GAAACGGTAG AGAATGTGCT GAATAAGTTA CGGAATACGG CGCCTTATCC GGCAATGTTT
AAAAAAGCGT TTGGTACAGA AGAGATCACC ACGGCCAGGA TGATGAAGGC CTTGTCACAG
TTTATGGTAA TGCTTGTCAG CGATCAGTCT AAATACGACA GCGTCATCCG AAAACAGGGG
CCTGTGTTTA CACAGGAAGA GCAACAAGGG TATACGCTGT TTCAGCAGAA GTGCAGTAGT
TGTCATAAGG AGCCCTTATT CACGGATCAG TCGTTCCGGA ACAATGGTAT TGGTACTGGG
CCGAACAATG ATGAAGGGCG TTATTCTGTG TCGCTGAATG CAGCAGACAA GTACAGGTTT
AAAGTCCCGA GCCTGCGGAA CCTGGCTTAT ACAGCCCCTT ACATGCATGA CGGGCGGATG
TACACGTTAA ATGCGGTCCT GCATCATTAT ACCTCGGAGG TACAGGACAT GGCTACGCTG
GATCCTTTGC TGAAACAAAA CGGCGTGCCG GGGATTCCTT TATCTGCAAA TGAACAGCAA
TACTTATTAG CGTTTCTCAA TACGCTCAAT GACCGGCATT TTATTACAGA CAAGCGTTTC
TCGGAGGAGT CGCAGTAA
|
|---|
| Protein sequence | MHRLQLILIT GFSLLLLACS KSDDILAFIG FKKPAHFPAP VYKLENNPVT QEGFELGRKL
FYESRLSRNN TVSCGFCHLQ TAAFTHHGHD VSHGIDDRLG SRNSPPIMNL AWNTTFMWDG
GVFDLDLQPI VPITNPVEMD ETVENVLNKL RNTAPYPAMF KKAFGTEEIT TARMMKALSQ
FMVMLVSDQS KYDSVIRKQG PVFTQEEQQG YTLFQQKCSS CHKEPLFTDQ SFRNNGIGTG
PNNDEGRYSV SLNAADKYRF KVPSLRNLAY TAPYMHDGRM YTLNAVLHHY TSEVQDMATL
DPLLKQNGVP GIPLSANEQQ YLLAFLNTLN DRHFITDKRF SEESQ
|
|---|
| |