Gene Cpin_4458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4458 
Symbol 
ID8360631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5550250 
End bp5550609 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content45% 
IMG OID644966614 
Producthypothetical protein 
Protein accessionYP_003124102 
Protein GI256423449 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.542652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0417353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCT GGCTCTGCCA GCTCTCCGGC CGTTATTTTG TGATGTTTGA GTTCTATCTT 
AACCAGGCAT ATATTGCGCA GAACCTTTGT GTAAACAAGG ATAAACCTCA ACTGCATTGT
AATGGCCGCT GTCATTTGAA GAAGCAGTTG AACGAAGAAG AAAGAAGAGA TCAGCATAAC
CCGGAACGAA GGGCTGACAA CAAAAGTGAG ATCTTTTATG ATGCTTCTTT TTATGTCGCC
GACCTCACGC CTGCCTGCAA AACATTGCAC ACCAACTATA ATAACCCTAC CTGCATCGGC
ATTCCTGTGG ATCAGGCGTT TACTATCTTC CATCCGCCTG GGATCTGCAT TTTCAGCTAA
 
Protein sequence
MTIWLCQLSG RYFVMFEFYL NQAYIAQNLC VNKDKPQLHC NGRCHLKKQL NEEERRDQHN 
PERRADNKSE IFYDASFYVA DLTPACKTLH TNYNNPTCIG IPVDQAFTIF HPPGICIFS