Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4454 |
Symbol | |
ID | 8360627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5547033 |
End bp | 5547563 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644966611 |
Product | DinB family protein |
Protein accession | YP_003124099 |
Protein GI | 256423446 |
COG category | [S] Function unknown |
COG ID | [COG2318] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0326634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0623797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTG TTACTTTTTT TCAGACCCTG CTGCTCCTCC TGGGTATAAG CGGTATCGTC AGGGCACAAA CTTCCGGTGA CGATATCGTA AAAGAGTGGG AACGCGCAAA AGCGTATACC AAAGAGTACC TGGACGCGAT GCCGGACAAG GACTATTCAC TCAAGCCAAC ACCTGAAATG CGTTCTTTTG CAGAGCAGAT GTTGCACATT GCCGACGCCA ATTATGGTTT CTCTTCGGCA GCCACTGGTG AAAAACCGCC TTTCGGTTTT GGAGAGGCCG AAAAAACGGC TGACAAATCC AAAGAAGGGG TCACAAAGGT GGTGATGGAA AGCTATGACT TTGCCATCAG CTGTATTAAA AAACTGACAC CTGCACAGCT GAACGAAAAG TTCAAACTGA TGGATCGTTT TGAAATCACT AAAGAACAGG CATTTGAGAA AGCCTTCGAA CACCAGACCC ACCACCGTGG ACAAACGACC GTTTACCTGC GGCTGGCTGG TGCAAAACCG CCTATGGAGA AATTGTTCTA A
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Protein sequence | MKTVTFFQTL LLLLGISGIV RAQTSGDDIV KEWERAKAYT KEYLDAMPDK DYSLKPTPEM RSFAEQMLHI ADANYGFSSA ATGEKPPFGF GEAEKTADKS KEGVTKVVME SYDFAISCIK KLTPAQLNEK FKLMDRFEIT KEQAFEKAFE HQTHHRGQTT VYLRLAGAKP PMEKLF
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