Gene Cpin_4454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4454 
Symbol 
ID8360627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5547033 
End bp5547563 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content47% 
IMG OID644966611 
ProductDinB family protein 
Protein accessionYP_003124099 
Protein GI256423446 
COG category[S] Function unknown 
COG ID[COG2318] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0326634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0623797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTG TTACTTTTTT TCAGACCCTG CTGCTCCTCC TGGGTATAAG CGGTATCGTC 
AGGGCACAAA CTTCCGGTGA CGATATCGTA AAAGAGTGGG AACGCGCAAA AGCGTATACC
AAAGAGTACC TGGACGCGAT GCCGGACAAG GACTATTCAC TCAAGCCAAC ACCTGAAATG
CGTTCTTTTG CAGAGCAGAT GTTGCACATT GCCGACGCCA ATTATGGTTT CTCTTCGGCA
GCCACTGGTG AAAAACCGCC TTTCGGTTTT GGAGAGGCCG AAAAAACGGC TGACAAATCC
AAAGAAGGGG TCACAAAGGT GGTGATGGAA AGCTATGACT TTGCCATCAG CTGTATTAAA
AAACTGACAC CTGCACAGCT GAACGAAAAG TTCAAACTGA TGGATCGTTT TGAAATCACT
AAAGAACAGG CATTTGAGAA AGCCTTCGAA CACCAGACCC ACCACCGTGG ACAAACGACC
GTTTACCTGC GGCTGGCTGG TGCAAAACCG CCTATGGAGA AATTGTTCTA A
 
Protein sequence
MKTVTFFQTL LLLLGISGIV RAQTSGDDIV KEWERAKAYT KEYLDAMPDK DYSLKPTPEM 
RSFAEQMLHI ADANYGFSSA ATGEKPPFGF GEAEKTADKS KEGVTKVVME SYDFAISCIK
KLTPAQLNEK FKLMDRFEIT KEQAFEKAFE HQTHHRGQTT VYLRLAGAKP PMEKLF