| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4450 |
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| Symbol | |
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| ID | 8360623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5543012 |
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| End bp | 5543911 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644966607 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_003124095 |
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| Protein GI | 256423442 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0322727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.15573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATT TTAGATATCC ATTCATGGTC CTTCTCGGAG GAGCGATGTA CGGAACGATG
TCGTCATTCG TCCGCTTAAT CTATTCATAT GGTTATAATG CAGCAGAAAT TGCCTTTTCG
CAGGCATTAT TAGCGGCGCT ATTCTTAGGC ATACTCTTAT CAGTGAGCAA TTTCCGGGCA
GCGAAGACGC CCTTATCCCG CCGGGATCTG TTCTCATTAC TATTAACCGG CGGTATCATT
GGTATTACCA ATTTCCTTTA TTATCAGTCG GTAAGTTATA TCTCCGCGTC GCTTGCCATT
GTGATCCTGA TGCAGTTCAC CTGGTTCAGT TTACTGTTGG AATGGGTCGT TTTTGGTCAG
CAGCCAGGTA AAGCTGAAGG GATAACTGTT ATCTTTATCC TGATTGGTAC GGTGATGGCG
GGCGACCTGC TTCATGCAAA GGAACTATCT TTCTCCTGGC AGGGTATTGT ACTTGCCCTG
GCATCTTCAT TGACTTATGC TATTTATATT GTTGCTAACA GCAGGGTAAG GAAGGATGTA
AAGTGGCAGT CGAAAAGTAC GCTTATCATG GTTGGTTCGG CAGTGACTAT TTTTATCGTC
AATGCAAAAA CGATCCTTGT TTCGAATCAC TTCGGATATG ATTTCCTCGG ATGGGCGATC
TTCCTGGCAG TGGTAGGTAC GACTATACCG ACAGCACTAT TCGCAGTGGG TATTCCGCAT
ATCGGTGCGG GCGCCAGTTC TATCCTGATG ACGATCGAAT TTCCGGTAGC CGTTATCTGT
GCGCATATTG TTTTAAAGGA GTCAGTCAGT CCTTTACAGA TAGGCGGTAT CGTTGTGATG
CTTGCAGCGA TTGCTGCGAT GAACTATTAT AAATCATTAA AAACCAGTAA GGAAATATAA
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| Protein sequence | MKNFRYPFMV LLGGAMYGTM SSFVRLIYSY GYNAAEIAFS QALLAALFLG ILLSVSNFRA
AKTPLSRRDL FSLLLTGGII GITNFLYYQS VSYISASLAI VILMQFTWFS LLLEWVVFGQ
QPGKAEGITV IFILIGTVMA GDLLHAKELS FSWQGIVLAL ASSLTYAIYI VANSRVRKDV
KWQSKSTLIM VGSAVTIFIV NAKTILVSNH FGYDFLGWAI FLAVVGTTIP TALFAVGIPH
IGAGASSILM TIEFPVAVIC AHIVLKESVS PLQIGGIVVM LAAIAAMNYY KSLKTSKEI
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