Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4400 |
Symbol | |
ID | 8360573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5479725 |
End bp | 5480498 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644966559 |
Product | NUDIX hydrolase |
Protein accession | YP_003124047 |
Protein GI | 256423394 |
COG category | [R] General function prediction only |
COG ID | [COG4111] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTACAA ACGATTTAGA CACTGCTTAT TTTGATGAAC AGCTGTATGT CAGGAATGTG GCTGTTGACA ATGTAATCTT CGGTTATCAT GACCGGGAAT TGAAAGTGTT GTTGCAAAAG CCGAAGCTCC TGGACAAATG GACGGTAGCG GGTGGTTATA TCCTTAAAAC AGAATCAGTT GAGGAAGCCG CGCATAATAT TGCTTTTATG CGGACGGGCT TAAAAGATCT TTTCCTGGAA CAATTTAAGA CGTTTGGGAG TCCTACAAGA ATAAAGGACG AGTGGCTGGA CATAGAGAAA GTATTTGAAA ATGCGGGTTT AAATCCGCCT ACGGAAGCCT GGATCCGGGA CTATAGTGTG TCCATTGCCT TTTATACGCT CACGGAATTC TCGCTCGTTA CGGTGCAAAA AGCATCCTTT GACGAGGCGA TTGAATGGTG GCCGGTGGCA CAGTTGCCCA GGATGATGTT TGATCATGCA TTGATCATTG AAGAAGCCCT GAAAGCTTTG CAAAGAGATA TCTATCACTA CCCTATCGGA TATGAGTTGC TGCCCCGGAA GTTTACGCTT CCGGAAATTC ATAGTCTGTA TGAGACTATT CTTGGCAAAA CACTGGACAA CCGCAACTTC ACGAGAAAGC TGCTTTCAAC CGGTATCATC AAAAAGCTGG ATGAAACCAG GAACATCGGC GCACACCGCT CCCCTTTCCT CTACAAATTT GAGAAGAAGC AATACGATGC CGCCCTGAAG AACGGTATCT TCTTAGGCTT TTAA
|
Protein sequence | MGTNDLDTAY FDEQLYVRNV AVDNVIFGYH DRELKVLLQK PKLLDKWTVA GGYILKTESV EEAAHNIAFM RTGLKDLFLE QFKTFGSPTR IKDEWLDIEK VFENAGLNPP TEAWIRDYSV SIAFYTLTEF SLVTVQKASF DEAIEWWPVA QLPRMMFDHA LIIEEALKAL QRDIYHYPIG YELLPRKFTL PEIHSLYETI LGKTLDNRNF TRKLLSTGII KKLDETRNIG AHRSPFLYKF EKKQYDAALK NGIFLGF
|
| |