| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4386 |
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| Symbol | |
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| ID | 8360559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5450414 |
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| End bp | 5453953 |
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| Gene Length | 3540 bp |
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| Protein Length | 1179 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966545 |
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| Product | hypothetical protein |
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| Protein accession | YP_003124033 |
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| Protein GI | 256423380 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.241332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00292232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGTACAT ATCAATTTAT CATATTGTTG TTAGTGTTGG GTACCGGACA GCGTGCCGTC
GCCCAGAATG TGCCGCTTAC ACCTACACCT TATACACCTG TTACACTGCC CGTACCTCCT
GCATACCAGT GTAACACTAT CAGTTATATC CGTAGCTGGC AGCCAAACAT ACCCATCACT
GATCCGGCGG TAGTGAAGTC TCCTTTTACA GCTTCCAGGT ACGTCAGACA AACAACCGAA
TACCTGGATG GCCTGGGACG GCGTTTGCAG TTGGTAGAAA AGCAAAAGAG TCCTGCGGGT
AAAGACCTGG TTACACCGGT ATTGTATGAG GCAGATGGCC GGGCACATTT CCAATACCTG
CCCTACGTTC CGCAAACAGG TAATACGAAT GACGGCAGTT TTAAATCCGA TCCTTTCCAG
GATCAACAGG CATTTTACCA GGATGCCGCC CTCAATCCCG GTATCAACAA TGAAAGTTAT
TTCTTCCACG AAACGACCTA TGAGCAATCG CCTTTAGGCC GGGAAGAGAA GACCTATCGT
CCTGGTAATG CCTATGCAAA AGAGGCCGGT AACAAGCCCG CACAACAGCT GTATCAGCTC
AATACAGAAA GTGATTCCGT ATTGATCTGG CGTTTTAACG GAACGGATAT CCTGCCGTTT
ACCAGTCAGC GATATGCGCC TGGTACGCTC CACAAGAAAA CGACGATGGA TGAAAATGGT
ACACAGCAGG TTGTATACAC CGATATAGAA GGACATGTGG TCCTGCGTAA GCAACAAGCC
ATTGAATTGC CGGGAACAGC CCATTACGGC TGGGCCTGTA CTTATTACAC CTATGATAAT
ATGGGCCGCC TGCGGGTCGT ACTATCTCCT AAGGCGGTAC AGGCGATTCA ATCTGATTGG
ATCATCACCA ACGCCATAGC AGACGAACTA TGCATTATTT ACCGCTATGA TGGCCGGGGA
AGAAAGGTCA TTGTCAAAGA ACCAGGTATT GATTCCCTGG AACGGATCTA TGATCTCCGT
AATCGCCTGA CCATGTCAAG ATCAGCTGTG CTGAAAAGCA GGAATATGTG GCAGCTCTAC
TATTATGATG ATACTCGGCG GCGGCTGAGG TCCACCGGCC TGATTGTGAA TACTGCCTCA
CGCGACTCCC TGTTAAAACG GATCAATGCC AGCCCCTACG ATTCCACAAA GCCTTATCCC
GGTGTAGATA CGACGAAAGA ATATTCGATG ATCACCAAAG ACCAGTATGA CGATTACCTC
TTTGTCGACA ATGTTTTTTA TTCCGGCATA GAACCTTTAA AGGTAGAAGG AGGTAGTAAT
ATCTATTTTG AACCACCGCC TCCTTATCAT ACGAATCTGC CCCATAGATT GCTGACAATA
AAGACATTGA CCATACCCGG ACTAAAACGG CTGCTCCTCA ATCGTTACTT CTATAACAAC
AGCGGCCGCC TGAGTCAGAC GGTATTCGAT AACGTCAGGT ATGGCCTGGA TATCACGTCT
TATATGTATG ACCTGGAAGG TAAACTGGTC TGTACTTATC TGACACAAAC GAAGACCAAT
TCGCTGACGG CCCCCGCCGC GCAACTACTT ACTATTTATC ATTATGATGC AGCCGGCAGA
CTGGATTCCA TCACCAAAAA ATACAATGAC AATCCCGCCC TGCGATTGTC AGTTGCAGAG
ATGGAATATG ATGAACTGGG CAGAATGAAG ACCAAGAAAT TATATGCCAG CGGTAACAGT
ACCCCGGTGG AGACGCAGAC CTTTACATAT GATCTCCGCG GACAATTAAC AGGTATCAAC
AAGCCATTTG TCAATACACC CAACAGCACC GATAACTGGT TCGGGCAGGA AATCTCCTAT
GAGACCGGTT TTGCCAATAG TTACTACAAC GGGAATGTCG CCGGTATAAA ATGGAAAAGT
GGCGCCGATG GTATGCCCCG TGCTTATGGG TATAGTTATG ACCGGATGGA TAGATTACTG
GCAGGTGATT TTAATCAGCA GAACGAGGGT AGTAGCAACT GGACCGCAGA TAAAGCAGAT
TTTTCCCTCA ATCGTCTTAC CTACGACATC AATGGCAATA TCCTGTCTAT GAAACAAAGA
GGTATGAACG GCATGGCGAT ACAGACGATT GATAGTCTGG AGTATGGTTA TCTGGACAAT
AGTAATCGCC TGAGTCATAT CACCGATCGT ACGAATAATC CGCAAACCAT CCTGGGCGAT
TTCAGGGAGT CGGTGAATGA TGACAGTAAG GATTATAGCT ATGATCCGGG TGGTAATCTG
GCAAAAGATA ACAACAAGGA TATCGATAGT ATCATCTACG ACCAGAATAA TAAACCTTCT
GTTATCTTTT GTAAGAAAGG GATGATCTAT TTTCAGTTCA ATTCCGAAGG AGAGCTGCTC
ACAAAGATCA TCCTGGATAC CAGCGCACAG CAAGGCAGTG CGAGGGTGAT CCAGTACGCA
AATGGCTTTG TGTGGGAGCG TGATACCATC CGGGTGATGA CACATGCTGA TGGCCGTATC
CGTCCTGTTT ATAAGACCGG TCAGCCGGTA CAATACGTCT TTGAGGCATT TGTAAAGGAT
TATCAGGGGA ATGTGCGCGC TTTACTTGGC GCAAACCGCG ATACCGCTGA TTACTTTGCT
TCTATGGAAA CAGCCAGGAG TGGTGTGGAG AATGTCTTAT TCAGCAATAT CGATAATACA
ACGGCGCCTT TACCTACAGG TTATCCGACA GACAATACCA CAGATCCCAA TGATTACGTC
GCTAAACTGA ATGGTGTAGA TGGCGCTAAG ATCGGTCCTT CGCTGGTATT GCGTGTGATG
AAAGGAGATA CGATATCCGC TGTGGCCAAA GCTTTCTACA AGAGTACAAC TGCCAATACC
TCCAGTAATA CGGCGGCCAG CATGTTGTCA GCGCTCTTAC AGGCATTCAG CAGTGGAGGC
GTGTCGCAGG GGCCACATAT GTCAGGCGGT CCTAATTCTC CTTTAGCAAC CAGTTTCAGT
AGTACGGATT ACCAGCAGTT ACTGAACCAG GAGCCAGCCC AGAATGAGCC GACATGGCCC
AAAGCCTATC TGTCATTTGT GCTGTTTGAT GATCAGTTCA AAGTAGTGCA GGGCAATAGT
GGCGTCAGAC AGGTACAGGG TGCACCTGAT GCACAGGTCA ATGTGGTCAT GCCACAGATG
ATTGCTGAGA AGTCAGGTTT TCTGTACCTC TACCTGAGTA ATGAATCTGC TGCGGATGTG
TATTTCGATA ACTTTGTTAT CCGCCATCTG CCTGGGGCTT TATTGGAAGA TACGCATTAC
TATCCTATGG GACTGTTGAT GGAAGGTATC AGTTCGAAGG CATTAAGGGG TACCTCATAC
CTGGATAACC GGTATCGGTA TAAAAGTAAT GAACTGCACA ACCGGGAAAT GAGAGTAGGG
CCGGGACTGG ACTGGTATAA TGATAATAAC AGGATGTATG ATGTACAGAC GGGAAGGTGG
ATTTCGGTGC AGCCGTTTAC GGGAAGTTCT TTAAATCCTT ACCAGTATTT ATGGGAGTAA
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| Protein sequence | MRTYQFIILL LVLGTGQRAV AQNVPLTPTP YTPVTLPVPP AYQCNTISYI RSWQPNIPIT
DPAVVKSPFT ASRYVRQTTE YLDGLGRRLQ LVEKQKSPAG KDLVTPVLYE ADGRAHFQYL
PYVPQTGNTN DGSFKSDPFQ DQQAFYQDAA LNPGINNESY FFHETTYEQS PLGREEKTYR
PGNAYAKEAG NKPAQQLYQL NTESDSVLIW RFNGTDILPF TSQRYAPGTL HKKTTMDENG
TQQVVYTDIE GHVVLRKQQA IELPGTAHYG WACTYYTYDN MGRLRVVLSP KAVQAIQSDW
IITNAIADEL CIIYRYDGRG RKVIVKEPGI DSLERIYDLR NRLTMSRSAV LKSRNMWQLY
YYDDTRRRLR STGLIVNTAS RDSLLKRINA SPYDSTKPYP GVDTTKEYSM ITKDQYDDYL
FVDNVFYSGI EPLKVEGGSN IYFEPPPPYH TNLPHRLLTI KTLTIPGLKR LLLNRYFYNN
SGRLSQTVFD NVRYGLDITS YMYDLEGKLV CTYLTQTKTN SLTAPAAQLL TIYHYDAAGR
LDSITKKYND NPALRLSVAE MEYDELGRMK TKKLYASGNS TPVETQTFTY DLRGQLTGIN
KPFVNTPNST DNWFGQEISY ETGFANSYYN GNVAGIKWKS GADGMPRAYG YSYDRMDRLL
AGDFNQQNEG SSNWTADKAD FSLNRLTYDI NGNILSMKQR GMNGMAIQTI DSLEYGYLDN
SNRLSHITDR TNNPQTILGD FRESVNDDSK DYSYDPGGNL AKDNNKDIDS IIYDQNNKPS
VIFCKKGMIY FQFNSEGELL TKIILDTSAQ QGSARVIQYA NGFVWERDTI RVMTHADGRI
RPVYKTGQPV QYVFEAFVKD YQGNVRALLG ANRDTADYFA SMETARSGVE NVLFSNIDNT
TAPLPTGYPT DNTTDPNDYV AKLNGVDGAK IGPSLVLRVM KGDTISAVAK AFYKSTTANT
SSNTAASMLS ALLQAFSSGG VSQGPHMSGG PNSPLATSFS STDYQQLLNQ EPAQNEPTWP
KAYLSFVLFD DQFKVVQGNS GVRQVQGAPD AQVNVVMPQM IAEKSGFLYL YLSNESAADV
YFDNFVIRHL PGALLEDTHY YPMGLLMEGI SSKALRGTSY LDNRYRYKSN ELHNREMRVG
PGLDWYNDNN RMYDVQTGRW ISVQPFTGSS LNPYQYLWE
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