| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4380 |
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| Symbol | |
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| ID | 8360553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5445897 |
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| End bp | 5446811 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644966539 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003124027 |
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| Protein GI | 256423374 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.072515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000817798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGATAG ACCTTCAGTT TAATAGCATC AGCGAGTTTC ACCATTTCGC CAACCTGCCT
CAACCGGAAC ATCCACTGGT AAGTCTGATT GATTACAGCC AGGTGCAATA TCCGGTGGAA
TATGATGAGA TCAGATTAGT CCAGCACTAT TATTCCATTG GACTGAAAAG ACATGTCGGA
AGAAAGTTTA ATTATGGACA GGAGGCTTAT GACTTCGAAG CAGGTATACT GGCGCTGGTA
GCGCCGCAAC AGGTGGTGCA GCTTGAAATC GATCACCAGG CAGCCGCTGA TCCCTCCGGA
TGGTTGCTGC TGGTTCACCC TGACTTTCTC TGGAATACGC CTTTGGCCAC CAAAATAAAG
AAGTATGAGT TCTTCGGATA TGCGGTAAAT GAGGCATTAT TCCTCTCAGA GAAAGAAGAA
ATCACAATGG TCGAGGTGTT CAGGAATATC CAGCGCGAGT ACCAGGCGAA TATTGACAGA
TTTAGCCAGA ATATCATCAT TACGCAAATT GAACTATTAC TGAATTATAC GGAGCGCTAC
TACGAGCGGC AGTTTATTAC ACGGCGTATT TCCAGTCACC AGGTATTATC GAAACTGGAA
GAGCTGTTAC ATACCTGTTT TGAGTCGGGC AACCTGATTC ATAAAGGGAT ACCCAGCGTA
CAGGAAATAG CCGACGCACT GCATCTGACA CCCAATTACC TGAGTAGTCT GTTGAAAGTG
CTGACGGGCA GAAGTACACA ACAGCATATT CACGATAAAC TGATAGAGAA GGCGAAGGAA
ATGCTTTCGT CTACACAGTT ATCCATCAGC GAAATTGCGT ATGAGCTGGG ATTTGAGCAA
CCAGCCTCGT TTAACAAATT GTTTAAATCA AAGGCACAGG TATCACCTTC CGTATTCCGG
TCGAAATTTA ATTAA
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| Protein sequence | MKIDLQFNSI SEFHHFANLP QPEHPLVSLI DYSQVQYPVE YDEIRLVQHY YSIGLKRHVG
RKFNYGQEAY DFEAGILALV APQQVVQLEI DHQAAADPSG WLLLVHPDFL WNTPLATKIK
KYEFFGYAVN EALFLSEKEE ITMVEVFRNI QREYQANIDR FSQNIIITQI ELLLNYTERY
YERQFITRRI SSHQVLSKLE ELLHTCFESG NLIHKGIPSV QEIADALHLT PNYLSSLLKV
LTGRSTQQHI HDKLIEKAKE MLSSTQLSIS EIAYELGFEQ PASFNKLFKS KAQVSPSVFR
SKFN
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