Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4379 |
Symbol | |
ID | 8360552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5444887 |
End bp | 5445849 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644966538 |
Product | hypothetical protein |
Protein accession | YP_003124026 |
Protein GI | 256423373 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0857974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00079087 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAAAATG TATTAACCAG TGTCGCGGGT GAAAATAAAG CCCATAAAGA GATTCCCGGT AATCCTTCCG TCGCGACCAG CAGCAGGCAT CAACTCAATA CCCGTGCAAA CGGAGAACCC CTAAGGGTAT TAAGCGAAGA GGATTGGCAA TTCTGGATAA CAAATGGGTA TATCGTTATA AAACAGGCGG TCCCCAAAGA ACAGGTGCAG ATACTGGCAG ATTTCCTCTG GACATATGAA AACAAAGACC CTAAAGACCC GAAAACCTGG TATAAACCCA CACTGCCTAT GAAAATGACG GAACTCAATA ACACCGGTAT GGTGGAGATA TATAATCACC AGTATCTCTG GGATAACCGG CAGTTTCCCA AGGTACATCA GGCTTTTGCG GATATATGGG GGATGGAGGA ATTATGGGTG ACGATCGACA GGGCTAACCT GAATTTCCCT ATTCGTCCGG GCCATGAATA CAAGGGATTC ATTCACTGGG ATTACGACCC GGAAACCAGG CCCCAGAATG TACAGGGTGT ATTGGCATTG GCAGATCAGA CGGACGAAAA TATGGGCGGT TTTCAATGTA TACCGGAACT ATTCCGGACT TACGATACCT GGAAACTGAC CCAGCCGGAA GACCGTAATC ATTTCAAACC TGACACCACA GGTTTTACGC CTACCAAGGT GAAGATGGAG GCAGGTGATC TGCTGATATT TAACAGTTTA CAGCCACATG GCATCCGTGT CAATAACAGC AAGGATAAGG TACGTATTGC ACAATATATT TCGATGATGC CGGCAGAGCA GGATAATGAG GAAATGAGAC AATGGCGGAT CCGCTCCTGG CAGGAAAAGA TGGTACCAGA GGGATATGCT TTCCCGGGTG ATCCTTTACA TAGAGAGAAA CAGCATCCTA TCGCACAATT AAGCGAACTG GGAGAAAAAC TGCTCGGATT AAGGAAATGG TAG
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Protein sequence | MENVLTSVAG ENKAHKEIPG NPSVATSSRH QLNTRANGEP LRVLSEEDWQ FWITNGYIVI KQAVPKEQVQ ILADFLWTYE NKDPKDPKTW YKPTLPMKMT ELNNTGMVEI YNHQYLWDNR QFPKVHQAFA DIWGMEELWV TIDRANLNFP IRPGHEYKGF IHWDYDPETR PQNVQGVLAL ADQTDENMGG FQCIPELFRT YDTWKLTQPE DRNHFKPDTT GFTPTKVKME AGDLLIFNSL QPHGIRVNNS KDKVRIAQYI SMMPAEQDNE EMRQWRIRSW QEKMVPEGYA FPGDPLHREK QHPIAQLSEL GEKLLGLRKW
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