| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4366 |
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| Symbol | |
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| ID | 8360539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5430058 |
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| End bp | 5430915 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966526 |
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| Product | Pirin domain protein |
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| Protein accession | YP_003124014 |
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| Protein GI | 256423361 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.133287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACACAC GCACAATCGT ACAATTGGTG GAAAGTCCAC TACATCGAGG TTTTCTGGGT
GAAGGACATG TAGCGGCAGC TGTTATCAAC GCAACTGATT TTTTTCAGAC CGATCCTTTT
ATTTTATTGA TGGATGATCG TCTTGATCTT GCTGGCGGGC CTCCCGTAGG AGGGCCGCAT
CCGCATGCAG GTTTTGAAAC CGTTACACTT GTACTAAAAG GTGATGATCA GGGTTGGGTA
ACAGGCAGTC TCGAACTGAT GACAGCCGGG AAAGGCATCG TTCATTCGGA AACTATTACA
GCGAATAGCA GCCTGCGTAT TTTGCAATTG TGGCTGGTGC TGGCTCCGGA GAAAAGGTGG
ATACAACCTA CCTGGCAGCA ACTGCTGCCC TCCGTAGTTC CCACAATAAA GACAGCACAG
CTTGATATCA GGGTGTATAG TGGTAACAGC AATGGCGCCA GCTCACCACT CCGTAATAAT
ACCCCGCTGA TAATGGTAGA TGTGATCATG CAGAAGATCG CATTATTTAC ACAAATCCTT
CCCGCAGCCT ATAATGCGCT TGTCTACGTG ATCGAAGGAC ATATATTGAT TGGCGAAACA
AGTATTGGCG CAGGACAGGC AGGGTGGCTG AGCATACCAG CCAGGAAAGG AGATAGCGAA
ATTATAGTCA CTACAGAAGG ACAGGAAGCC CGGATTATTT TATATGCAGC CGAACCTCAC
CATGTGCCTG TTGTCAACCA TGGGCCTTTT ATAGGTGACT CACCTGAAGA TATTGCCCGT
CTGTACAAGG AGTATCAGGA GGGGCGTCTG CCCCATTTGA ATGACCTGCC AGAGAGCAGT
AAGATCATAT ATAGATAG
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| Protein sequence | MYTRTIVQLV ESPLHRGFLG EGHVAAAVIN ATDFFQTDPF ILLMDDRLDL AGGPPVGGPH
PHAGFETVTL VLKGDDQGWV TGSLELMTAG KGIVHSETIT ANSSLRILQL WLVLAPEKRW
IQPTWQQLLP SVVPTIKTAQ LDIRVYSGNS NGASSPLRNN TPLIMVDVIM QKIALFTQIL
PAAYNALVYV IEGHILIGET SIGAGQAGWL SIPARKGDSE IIVTTEGQEA RIILYAAEPH
HVPVVNHGPF IGDSPEDIAR LYKEYQEGRL PHLNDLPESS KIIYR
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