Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4361 |
Symbol | |
ID | 8360534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5424270 |
End bp | 5424662 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644966521 |
Product | protein of unknown function DUF336 |
Protein accession | YP_003124009 |
Protein GI | 256423356 |
COG category | [R] General function prediction only |
COG ID | [COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0204741 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAATTA CAATGGAACA AGCGACAACT GCCGCCCGAC AGGCAGAATT AAAAGCGACC GAAATACAGG TGCCGGTTAA CATCGTCATT CTCGATACAG CCGGATATTT GAAATTCTTT GTCCGCATGG ATAATGCCTT TATCGGATCA ATAGACATTG CCTTGCAAAA AGCAAAAACT GCAATGCTCT TCCGGACAAG CTCTGAAATG GTGGGCGAGT TCCTTAAACC CGAGGCACAT GCTTATGGAC TCTCGCAGAC TAACGGAGGA CTTGTAGGCT TTCCCGGCGG CCTGCCTATA TTAAAAAACA AAGATATCAT CGGCTACATC GGTATCTCGG GAGGGGCTGT ACCCCAGGAC CTGCTAATTG CAACGGCTGG CAGCACGATT TAG
|
Protein sequence | MEITMEQATT AARQAELKAT EIQVPVNIVI LDTAGYLKFF VRMDNAFIGS IDIALQKAKT AMLFRTSSEM VGEFLKPEAH AYGLSQTNGG LVGFPGGLPI LKNKDIIGYI GISGGAVPQD LLIATAGSTI
|
| |