Gene Cpin_4361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4361 
Symbol 
ID8360534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5424270 
End bp5424662 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content48% 
IMG OID644966521 
Productprotein of unknown function DUF336 
Protein accessionYP_003124009 
Protein GI256423356 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0204741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTA CAATGGAACA AGCGACAACT GCCGCCCGAC AGGCAGAATT AAAAGCGACC 
GAAATACAGG TGCCGGTTAA CATCGTCATT CTCGATACAG CCGGATATTT GAAATTCTTT
GTCCGCATGG ATAATGCCTT TATCGGATCA ATAGACATTG CCTTGCAAAA AGCAAAAACT
GCAATGCTCT TCCGGACAAG CTCTGAAATG GTGGGCGAGT TCCTTAAACC CGAGGCACAT
GCTTATGGAC TCTCGCAGAC TAACGGAGGA CTTGTAGGCT TTCCCGGCGG CCTGCCTATA
TTAAAAAACA AAGATATCAT CGGCTACATC GGTATCTCGG GAGGGGCTGT ACCCCAGGAC
CTGCTAATTG CAACGGCTGG CAGCACGATT TAG
 
Protein sequence
MEITMEQATT AARQAELKAT EIQVPVNIVI LDTAGYLKFF VRMDNAFIGS IDIALQKAKT 
AMLFRTSSEM VGEFLKPEAH AYGLSQTNGG LVGFPGGLPI LKNKDIIGYI GISGGAVPQD
LLIATAGSTI