| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4358 |
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| Symbol | |
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| ID | 8360531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5420386 |
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| End bp | 5422188 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644966518 |
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| Product | Diverse 7TM receptor transmembrane region |
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| Protein accession | YP_003124006 |
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| Protein GI | 256423353 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.934126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0321305 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGCAA GAGCACAACG GCCGGTGTAT ATTGATCACA CCGCTGCCGA GTACATATTT
ACCTATGGAG AGATAAACTG GTTGGAAGAT CGCACCGGAT CTATGGATTT TGAGGAGATC
AGGAGCCGGG ATGCGGCAGG TACATTCCGG ATCAACACGG ATTATTATCC TAAGAACTTT
AATCCCAGTT CCGTTTATTG GTTTAAAGTA CTGGTAAACT TTTCTGATGG GATTCCCAAT
AACCAGCGTT TATTTGAGTT CTATGATCAG ACCATCGAAG AGCTGACCTT ATATTTGCCG
GATGCCCATG GAGAATATAC GGAGCTTCAT TCGGGTGCAG CGAATGCCTT CAAAAACAGG
CTTTACAGAC ACAAAAATTT TGAGTTCCTT ATTCCTGATG TGTCCAAAGG TACCTACGTC
TGCTATGTGC GGATAAAATC TTTAAATGAG ATTAATTTCA TTATGGTGTA TCGGTCGGTA
GAGCGGTTTA TCAACTATGC CCTGGTTGAA TATATCACTT ACGGGTTGTT CTATGGCATG
ATACTCGTTT TCTGTTTATA CAATCTGCTG ATGCTGCTGG CTACCCGTCT CAGTCACTAT
CTGTATTATG TATTGTATAT CGTGAGCGTA GGCGTTTATG AGATGAGTAC CGATGGTATC
GCATTTCAGT TCATATGGCC GGATACGCCG GGCCTGAATG AGTATATGTA CGGTATCTCG
CTGTATTGCA TGAGTATATT CGCACTCATT TTTGCCAGAA CGCTGTTACG CGTAAAAAGG
CAGAGTCCAC TATTATATAG TCTGATCAAC TGGATCATCG TTCTACGGAC TGTTTATTTC
CTGGTTTGTC TGTTTGCCAG GAGGGAATGG TTTATTTATA AATTTCTCGA TTTTATCCCC
CTTTTTGCCG CATTCCTCTC TGGCTTTGTT ATCTGGTGTA AAGGCTTTAA ACCTGCACGC
TTCTTTGTGC TGGGGAATGC AATACTTTTT ATTGGCGCAA TTGTAAAACT GATCACGGTA
TTGGGTTTCG TACAAGGAGT GTCAGGTGTA GTAGGACATT ACAGTATGGT GATTGGTTTT
GTTATGGAAA TGGTACTGCT GTCTTTTTCC ATAGGCGATC AGGTAAGACT TTTCAGAAAA
GAAAAGAAGC AGGCACAGGA TGATGCATTT TATCATATGC AACACAACCT GAAGTTACAG
GCGTCTGTCA ATCAACAGCT GGAAGAACAG GTCGAAGCGC GTACAAGACA GCTGGAGCTT
CAATCCAGGG AGATACACGA ACAGGCGCAG GAGATTGCGC GTATGAATAA GTTGCTGGAA
AAAGACAATG CGGAACTCAA GACGAATATA GAAAAGATCA CCGATGCCCG AATTAAATCA
GCAGAGCTGA CATTTGAGGA ATTCAGTCAG AAATATCCTG ACCAGGAGAA GTGTTACAGC
TTCCTGGCTG ATCTGAAATG GAACAAAGGT TTTACCTGTA GGAAATGTGG GTATGCCAAC
TATAGCACCG GCCGTAAACC ATTCAGCCGG CGCTGTAATA AATGTGCATA TGAAGAATCA
CCGATGCATG ACACAATATT TGAGAATAAC CGTATACCTA TCAACAAAGC ATTCTACATC
GTATACCTGG TGTTTACTAC CAAAGGCAAC ATTTCCTCTT ATCAGATTGC CGAAAAAACC
GACATGCGTC AGGGTACCTG CTGGGCATAT GCTGCCCGTG TAAAAACCCT CTTGGATATG
GAAGCAGGCG CCTCAAAAAA GAGTAAAAAA GGTAGCTGGA CTGACCTGAT AATGAAAACC
TGA
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| Protein sequence | MCARAQRPVY IDHTAAEYIF TYGEINWLED RTGSMDFEEI RSRDAAGTFR INTDYYPKNF
NPSSVYWFKV LVNFSDGIPN NQRLFEFYDQ TIEELTLYLP DAHGEYTELH SGAANAFKNR
LYRHKNFEFL IPDVSKGTYV CYVRIKSLNE INFIMVYRSV ERFINYALVE YITYGLFYGM
ILVFCLYNLL MLLATRLSHY LYYVLYIVSV GVYEMSTDGI AFQFIWPDTP GLNEYMYGIS
LYCMSIFALI FARTLLRVKR QSPLLYSLIN WIIVLRTVYF LVCLFARREW FIYKFLDFIP
LFAAFLSGFV IWCKGFKPAR FFVLGNAILF IGAIVKLITV LGFVQGVSGV VGHYSMVIGF
VMEMVLLSFS IGDQVRLFRK EKKQAQDDAF YHMQHNLKLQ ASVNQQLEEQ VEARTRQLEL
QSREIHEQAQ EIARMNKLLE KDNAELKTNI EKITDARIKS AELTFEEFSQ KYPDQEKCYS
FLADLKWNKG FTCRKCGYAN YSTGRKPFSR RCNKCAYEES PMHDTIFENN RIPINKAFYI
VYLVFTTKGN ISSYQIAEKT DMRQGTCWAY AARVKTLLDM EAGASKKSKK GSWTDLIMKT
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