| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4350 |
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| Symbol | |
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| ID | 8360523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5408970 |
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| End bp | 5413292 |
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| Gene Length | 4323 bp |
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| Protein Length | 1440 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644966510 |
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| Product | WGR domain protein |
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| Protein accession | YP_003123998 |
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| Protein GI | 256423345 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3831] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0376935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCA GGTTTATTTA CCAGGACGAG AAATCAAACA AATTCTGGGA CATTGAAACA
AACGGTACCG ACCTTACTGT ACAATATGGA AAAGTTGGCA CAACAGGACA ATCCCAAACA
AAACAATTCG CTTCCGAAGA AGAATGCAAA AAAGCAGCTG ACAAACTGAT TGCGGAAAAA
ACAAAAAAAG GGTATGTCGC CCTCCCCGCC GCAGAAAAAT TAGTCATACC TGTAGAACTG
TACGAAAACC TTTTGGCTGT AGCAGATTAC CTGGAACAAA ATTATCCTGA CGTAAAGCCG
GAAATTACGC CCGTGAATGA AGATAACATT TCTGCGATGG AAGACTGCGT CGACTTTGAA
ATGCCCTCCG ATTACGTAGA ATACTGGCTC GAAAAAGGCA ATTTCTCTTT CGTGAAAGGA
GATTTTATCT GTGATGTTTA TGCTTTCACG GATGAGTTTG AGCAAGCCTA TAATCTGTAT
TACACCTTTA AGTTTTTTGA GGGCCACTAC AAATTGAAGT TCGACCTGCT GGAACAGGAA
ATGGATTATT TCAGCCAGTG CTTCTGGGTA CTTGGACAAG TAGGAGACGA CCAGGAAACG
AGAGTGTATG TGGGTGATCC TTCGGGAGCT GTACATATGA TCCACTTCCC CAAAGGATTT
GGACACACTG ATCAGGAGGG CTTCGCCGCA GTAATGGCTC CGATTATGGC TAAAAGACCA
TTATTCAGCA TGATGATTGT GAAGAGTGCC AGTCCGCTTG ACATTGAAAC ACCTTCCGTT
GACCAGCTCG CTGAAAAACG CGCGGCCGGT GCAGCTCAGG ATGGTTTGAG AGAAGTATCT
TATAACGAGG TACTTACGCT GTTAGGTGTG GAGCAACTAT TTGACTACTG GGAGGATGAA
GACAATTTCT ATGCAGAAGA ATATGAAAGC GAACGTGCCT ATTTCGAAGA ACAAGTCTTC
CTTTATCATG AGGGGGATCT GCATCTTGAC AGAGAGCTGG CAAGCTACGG TTTTATCGTC
GTACGTGGTA ATCTGAATAT TGAAGGGGAG CTTTCTTCCA GATATTATGT AACCGGTAAT
ACCACAGTTG ATTTTCTGAA ACTGGAATAT TTCCAGAAAA CGCTTGGAAA AGAGACAGTC
AGATATGTCG CTACTGCCTG TGCGGAGGAT CACGAAGTAC TAAGAACACT CCCACACAGA
GAGATCCATG TACCGTATTT CTTCTCCTGG TTTTATGACC TCGATTCTTT CACCTTTTCT
CCGGAAACGG TCATCACTGC ACTATATAAT TACGATGACC TGATTACCTA CCAGACAGAC
GCGCTCCTAC TGACATGGCA TGAATATGCT TATGTATTTA AGCCGGAGTT GTTCTACTGG
ATTGAAGAAT CATGGCATGA TTCCATGGAA ATCAATTACA CTGCCTTCTA TGAGGCCATC
AAGGCCGGCA AGAATCCTTT TCTGGATGGC GTAACACCAG AAGGTATCAG GTTGGTGAAA
AAGGGAGCGG CATTGAAAGA AGAAAATGAT CTCCCCGGCG CTTACCAGTT GTACAAAGAG
GCGATCAGTA AGTCTCCGGG GTATTACCCT GCCTATAGTG CTGCCGGCAG ATTGCTATAC
GTTCAGAAAG CCTATGCGCA GGCAATGGAG CTGTATGCCA AAGGGATTCC GCTTACACCT
GAACATGTGC TGTATGAATT TGAATGTCTG CAAAAAGGAG GACTCTCCGC CATCCGGATG
GGCGCATATG ACCAGGCTAT TGAATGGGCA CAGCTGGGCA TTGCCAGAAA AAGGGATACC
CACTTCTACT TAAGGATCAT TGCAGAGGCG CTGATCTATA TGGGAGAACT GGAAGAGGCG
AAAACTTATC TGGAAAAATC CATTGATATT GAAGGCTTTT TCAGCAACTA CTGGTTAATG
GGATTGATCT ATTTCCGTCA GGGAGATACC GAAAAGGCAG ACACCTATTA TCAGCAGGCG
CATAGCGCAA ATGATAAAGC CAGACCTTAC ACGGAACATC AGGATCTTAC CTATATTTTT
GGTGAACCTG TGACGGTAGA CTGGGATACT AAAAAACCGG TGTCCACGGA GAAAGGACAG
GAATACTGGA ACAATTTCTT AACTGACACC CTCAAAACAT ATGGTCCTGA TCTATACGAG
AGAATTGGTC AATCGCCATC TCAATGGATC TATGGAAAGA TCAGCAAAAT ACCGCCTGCG
TTCAGAAGCA AAGAGATGAT GTATGCCCTG CTGGACCACA GGACGAAAGG ACAACTGGAT
GTCACCGGAA GCATCATCGC CTTTTTCGAC CCTGCATTCC TGACGGAAGA AACCGTTCTC
CATGCTATAC AGAGGACTGA GCCTGCGGAG TACAAAGAGA TTCCTGCACA ATTCTTTTCT
GAAAAGCTGT TACGGTTACA CCCTGAAGGC ATCAACCTGA CGGTTTTACC AGCAGATCAG
TTAAACTATG CGCTTTGTTT TGATGCAGTG AGTCAAAATC AGCATAGCTA TCAGGCGGTG
CCTAAGGAGT TTCAGGACGA GCGTATGAAT ATAGCCCTGA TTGCAGGAGG AATTCTCGGG
GACTATCCTT ATAAAGAGCT CCCTTCCAAA TATTCCTCCA ACGAATATAT CAAACTGGCC
ATTGAGACCC ATATCCTGGC AATCACCAAT CTCCGCGCAG GACTGGTTGA CAAGGAAATC
TATGCGTACG CTGTTGAAAA GTACGGTAAT GACCCTATGT GGCCTTTTAT CGTGGAACGT
TACGACACAG ACGCATGGAA ATATGGCTCT CTTTCATCCA TAGAAAGAAA GGGTGAAATG
GTACGTAAGT TTGGCATTGA CGTTTTCGAT CATGTAAATG CAAAGTATGT AGGAAAACAG
GACTACGATT ACTACAAAAA GCACCTGGGA CATCTTCCTG CGTTTGCAGA GAAAGCAAGC
TCCTATGGCT GGACAAAAAA CAAGGACAAG GTCGATGAAT ATGATGACAG GAAAGAATTC
AGTTATGATA CTTTCCGTAA AGTATGGGCC TGTTTCTGGA CAGAAGACTA TATCATCAAA
GCGCTGGATA AAGACTCCGA CAAGGAACAT CTTTATAGTC TCCCGGATAA GTACAAAACA
CAGCGGATCT GCGATATCGC TGTAAGCAGA GATTCCTATG ACTTCGCCCA TGTTCCGGCA
CAGTTTGTCA CGAAGGAAAT GTGTATGGAT GCCTGCTCCA CAAGCTATGG ATCTGCCCTT
GAATACGTTC CATTAGAGAT GCGTACCCGG GAGATCTGTG ACGCAGCTAT TGCCAGGAGT
GCTGAAAATA TCAAATTCGT GCCTGTTCCG CTCCGTACCG TTGAAACATG CGGCAATGTG
ATTGTAAGGG AAAATAACCT GACAAACTAT ATCCCGCATG CAATATATAC AGCCGTGTTT
GAATGGTGCT TTAAGGCCAG AAAGAACAGG TTTTCCAATG ACTATCTCAT GCTGCATTGG
GGTTTAGGGC TGATCATAGA CAAAAACTAC ACCGCGGCAA GAGAAAAACT GGCGGCTGTG
ACTTCAGAGA TCGGCGAATA CCATCACCAT GCGACCTATT ATATCGGCTG GAGCTATTTC
CTGGAAGGAG ATGTGAAAAC AGCGAAGGAA TACTTTACGC AGTCTCAGGA GATTGCTAAA
TCGGTGGATC TCTACGGATC CTACAGGTTA ACCTTCCCAT ACGCATCTTT CGAGTTACGG
CCAGTACACG AGGTCTATCC GTTCAATAAA GACCTGTTTG ATGAACAAAT GAAAGAGGCT
TCGGCACTTG TACAAAACGG TTCTTATGAA GAGGCGCTTA CGTTACTGGA AAAACAGGAA
AAACTGCTGA CGGATTCCAA TTGCTCAGAA ATGAGATGGT GGGCTTATGT ATGGGATCAC
CAGCGCTATG CCCTTTATGA AGCAGGTCAG GAGGAAGCGT CTTATACCAT CTGTCACCGT
ATTATCGCTG AATTAGGCAA AGTAGCACTG TGGGATTACC TGGAAGAATT CAATATTATC
CGTGCTGCGC TGCGTGCCGC TAACAATAAC CTTGCTTACA GGTATTATCT GACGGCGAGC
GACCTCGCTG GTGTAAAAGA GGGTCTTAAT CATATTAAAA CGACGATGAA GACGATCGCA
CCGATTGAGG ATAAAAGCGT CCTGAATATG TTCTATGAAA CACAGGCACT GCTATTATAC
AAAGCCATGG GTTTTGATCC GGCGTACAGG AAAGATCTTG AGAAGGTAGT CGCGAAGATT
GAGAAACTGA AACAGAAAGA AGAAATAGAA CTGAGTGACG AATTTGAAAA GATAAAATTA
TAA
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| Protein sequence | MKARFIYQDE KSNKFWDIET NGTDLTVQYG KVGTTGQSQT KQFASEEECK KAADKLIAEK
TKKGYVALPA AEKLVIPVEL YENLLAVADY LEQNYPDVKP EITPVNEDNI SAMEDCVDFE
MPSDYVEYWL EKGNFSFVKG DFICDVYAFT DEFEQAYNLY YTFKFFEGHY KLKFDLLEQE
MDYFSQCFWV LGQVGDDQET RVYVGDPSGA VHMIHFPKGF GHTDQEGFAA VMAPIMAKRP
LFSMMIVKSA SPLDIETPSV DQLAEKRAAG AAQDGLREVS YNEVLTLLGV EQLFDYWEDE
DNFYAEEYES ERAYFEEQVF LYHEGDLHLD RELASYGFIV VRGNLNIEGE LSSRYYVTGN
TTVDFLKLEY FQKTLGKETV RYVATACAED HEVLRTLPHR EIHVPYFFSW FYDLDSFTFS
PETVITALYN YDDLITYQTD ALLLTWHEYA YVFKPELFYW IEESWHDSME INYTAFYEAI
KAGKNPFLDG VTPEGIRLVK KGAALKEEND LPGAYQLYKE AISKSPGYYP AYSAAGRLLY
VQKAYAQAME LYAKGIPLTP EHVLYEFECL QKGGLSAIRM GAYDQAIEWA QLGIARKRDT
HFYLRIIAEA LIYMGELEEA KTYLEKSIDI EGFFSNYWLM GLIYFRQGDT EKADTYYQQA
HSANDKARPY TEHQDLTYIF GEPVTVDWDT KKPVSTEKGQ EYWNNFLTDT LKTYGPDLYE
RIGQSPSQWI YGKISKIPPA FRSKEMMYAL LDHRTKGQLD VTGSIIAFFD PAFLTEETVL
HAIQRTEPAE YKEIPAQFFS EKLLRLHPEG INLTVLPADQ LNYALCFDAV SQNQHSYQAV
PKEFQDERMN IALIAGGILG DYPYKELPSK YSSNEYIKLA IETHILAITN LRAGLVDKEI
YAYAVEKYGN DPMWPFIVER YDTDAWKYGS LSSIERKGEM VRKFGIDVFD HVNAKYVGKQ
DYDYYKKHLG HLPAFAEKAS SYGWTKNKDK VDEYDDRKEF SYDTFRKVWA CFWTEDYIIK
ALDKDSDKEH LYSLPDKYKT QRICDIAVSR DSYDFAHVPA QFVTKEMCMD ACSTSYGSAL
EYVPLEMRTR EICDAAIARS AENIKFVPVP LRTVETCGNV IVRENNLTNY IPHAIYTAVF
EWCFKARKNR FSNDYLMLHW GLGLIIDKNY TAAREKLAAV TSEIGEYHHH ATYYIGWSYF
LEGDVKTAKE YFTQSQEIAK SVDLYGSYRL TFPYASFELR PVHEVYPFNK DLFDEQMKEA
SALVQNGSYE EALTLLEKQE KLLTDSNCSE MRWWAYVWDH QRYALYEAGQ EEASYTICHR
IIAELGKVAL WDYLEEFNII RAALRAANNN LAYRYYLTAS DLAGVKEGLN HIKTTMKTIA
PIEDKSVLNM FYETQALLLY KAMGFDPAYR KDLEKVVAKI EKLKQKEEIE LSDEFEKIKL
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