Gene Cpin_4337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4337 
Symbol 
ID8360510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5396076 
End bp5396501 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content42% 
IMG OID644966498 
Productresponse regulator receiver protein 
Protein accessionYP_003123986 
Protein GI256423333 
COG category[T] Signal transduction mechanisms 
COG ID[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.350123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000570677 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAATTT TAAGAATATT ACTAGCAGAA GATGATGATG ACGACAGAGA AATGTTCTGC 
ACTTTTCTGG CCGGACGCAA TGATGTTGAG CTTTTCGCCT GTGTTGAAAA CGGGCTTGAA
GCGATAGACG CTCTGGCAGC GATAATATCA TCAGATAAGC TGCCTGATAT GATCCTGCTT
GACCAGAATA TGCCAAAGCA AAACGGACTG CAGACACTGA AAATATTGAA AGAAAACCCG
GTATATGCAG CTATTCCTGT TTTTATCTAT TCGACATACG CCGACGGCGC TTTACGGGAG
CGTAGTTTAC AGGCCGGCGC TATTTCAGTG TTTTCTAAGC CTTTTACGAT GCAAGGATAT
AATGAAATGC TCGAAAGTAT GCTGAGTGCC ATGCACAGGT CTTCATTTGA TAAAAATATT
TTATAA
 
Protein sequence
MSILRILLAE DDDDDREMFC TFLAGRNDVE LFACVENGLE AIDALAAIIS SDKLPDMILL 
DQNMPKQNGL QTLKILKENP VYAAIPVFIY STYADGALRE RSLQAGAISV FSKPFTMQGY
NEMLESMLSA MHRSSFDKNI L